Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1697 ATGGCTTCCACCAAGCTCTTTGCAACAATTTTTGTGTTTTCCCTGCTTTTTGCTCACTCAATAACAACACTTACCCATGCCTGTGGCACATGCACACCTCAAAAATGCCCCCGTGACGCATTGAAGCTTGGTGTCTGTGCTGATATTCTGGGACTTGTTGTTATTCCTGGGTCCCCTACTTCTAGCAAGTGTTGTGCATTGCTAGAGGGTTTGGTGGATTTGGAAGCAGCACTTTGCCTATGCACTGCTATTAAGGCCAATGTGCTTGGTATCAACTTGAATGTGCCTATCACCCTTAGCTTGCTCCTTAGTGCTTGTCAAAAATCGATTCCTCCTGGTTTCCAATGTTGA 351 0.4558 MASTKLFATIFVFSLLFAHSITTLTHACGTCTPQKCPRDALKLGVCADILGLVVIPGSPTSSKCCALLEGLVDLEAALCLCTAIKANVLGINLNVPITLSLLLSACQKSIPPGFQC* 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1697 116 PANTHER LIPID TRANSFER PROTEIN 34 116 - -
Dod08g1697 116 CDD HPS_like 33 116 IPR027923 -
Dod08g1697 116 SMART aai_6 36 116 IPR016140 -
Dod08g1697 116 Pfam Hydrophobic seed protein 36 116 IPR027923 -
Dod08g1697 116 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 38 116 IPR036312 -
Dod08g1697 116 Gene3D - 37 116 IPR036312 -
Dod08g1697 116 PANTHER - 34 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g1697 Dod-Chr8 40396298 40396648 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g1697 36 116 Acyl Lipid Metabolism Gene Families AT4G22490 39.024 1.83e-13 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g1697 - - gmx:100306307 172.555
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g1697 08 40396298 40396648 Dod08g1697 08 40396298 40396648 ECH
Dod08g1697 08 40396298 40396648 Dod09g0881 09 28420584 28421128 PCT