Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g0840 ATGTCTCCTGAGCCCTTTGATTCAAGCTTGCTTTTGTCTATTCCTGATGATGTGTTTGCCATCGTTTCTCGGTTCTTATCCCCAAGAGATGTGTGTAATCTTGGTCAATGCTGCAGGAGCTTGAATGCTCTTGTGGCCTCTGAAAAACTATGGCTCACACAATGTGATGTTTTGGGCATAGTGCCCCATAAGGACCTTGTTGAGTGGCGAAAGGGTGTGTCGTCTTACAAGGCGCTTTGCCGTTTCCTTCTGAGTGTTCAGCCACTGATTGGATTGTGGGTTCATCAGAATCCGGAGCTCGGCAACGTGGTGTATGTCATGCCCGGTTTTGTTTCAGTTGTTGGTTGTAGGATCATTCCTCAGGAGCTTGGTCCATTGGGCATTGAAGATGGTCCAATCCTATGGGCATCAGTCTTTGAAATCGTTGGTGATTTTGATGGTTTGACTACATTTTTTCTTCATGGAAGGGAGAAGGGAATCGACTATATTTATCCTGGTTCAGTCAAGCCTATACAAAAATCTTGCAATGTATTGTTTCTTGAGGTTGAACCCGGGCAACAAAAGAGTGTTAGTACTTTGTTGCAGAGTAAAAGCTTTGTGCATAGCTCAGGTGTGGAGTTATCAAGGAAGGTTTTCAGGTCAAACAGTGATCTTTCTCGGTCACAAAGGATGAATGGAAATAATGAGGCAATGGTTACCTTCAGCAAATTAGCATTTAGTGATAGAAGAAAGTTGCTGGAGGTCACTACTAGCCAAGTTCGACAAAAGATTCCTGATACAGTGGTTGGACCTTTGTTTCCTAGGTTAGGGGATGATGAGGAAAACTTTCAGAAAGATTTGGTGCGCTTGTGGGAAAGAAGATCAATCCTTAGTCAAATGTACAAGCTTGGTAGTAGTCAGATGGACTATCAGGCAAGTTCTCAAGAGGCAGTTGGTCCAATGCACTTACAGCTTGACGATATCAGGAAGAGTCTTAACTGTTCAAGGGCAATATGTAATCCTTTGCCCGAGGAGGATGGTCACATCAAAAGAAAAGGACTTCGTGGATATTTCTGGAATAGCCTTAAACAGATGCTTGGAAGATCTAATTCAGTTAATGGCAATCATTCAATTTCCAAGAAGTTTATTTCTAACAGTGAGATGAGGCACGCACGGCTTCAAGAATTTCTTAAATCAGGCGACACAATAAGACTAATATTAAACGCCTCAACTGTTAAGTTATCTTCTTATAGAGCATGGCCAAATATGCATGACAGTCGGTTTGCACTTTACAAGCTGCCATTGCGAGTTCCCAGAGCTGACCATGAATATGCTGGTTTATGGGGAGGGACTTTCGGTTGGCCCCCTGGAAAGCCTTCTGAAGATAAGCCTGGAAAGGCTTTATTCTTTCTTCTGCTATCTTACGAGGAGTCCCAGGGTCAACAGCTTCTCATTGCAACCAAAATATTGGAAGGCACTCACTATGTCTTGCATCCTAATGGTTCTGCAATGTTTATAGTGAATATTAATGAGCCTTCGACTGAGCCCTTTCCTTGGGGCACTGATGCAGACTCATTTCCAGTGGATGTTAAGCATGCTTTCATGGGAGAGGGTATTGCAAGTGGTTATGGGTTCAGATACCCCGGATCAAAGCCCGGTTCCCTCTTTGTTTTTGAAAATGGTGTCATGGCCTTCATTTGGAAGGAGACAAGGGCTGTTTTGACCTTGCAAAGACTTAACTTGCAAGAACTTCTGAAGAAGGGTGAAAGGGTACCTTCTCTGCCTCCTGTTGCCAATTTTTCATATCTGACAAAGTCCTACTCAAATGTGTTTGCTGGCTTTCCAAGCTCTTCCAATTGTTTGTCTTCACCAAGGGAAGGACAACACTAG 1869 0.4339 MSPEPFDSSLLLSIPDDVFAIVSRFLSPRDVCNLGQCCRSLNALVASEKLWLTQCDVLGIVPHKDLVEWRKGVSSYKALCRFLLSVQPLIGLWVHQNPELGNVVYVMPGFVSVVGCRIIPQELGPLGIEDGPILWASVFEIVGDFDGLTTFFLHGREKGIDYIYPGSVKPIQKSCNVLFLEVEPGQQKSVSTLLQSKSFVHSSGVELSRKVFRSNSDLSRSQRMNGNNEAMVTFSKLAFSDRRKLLEVTTSQVRQKIPDTVVGPLFPRLGDDEENFQKDLVRLWERRSILSQMYKLGSSQMDYQASSQEAVGPMHLQLDDIRKSLNCSRAICNPLPEEDGHIKRKGLRGYFWNSLKQMLGRSNSVNGNHSISKKFISNSEMRHARLQEFLKSGDTIRLILNASTVKLSSYRAWPNMHDSRFALYKLPLRVPRADHEYAGLWGGTFGWPPGKPSEDKPGKALFFLLLSYEESQGQQLLIATKILEGTHYVLHPNGSAMFIVNINEPSTEPFPWGTDADSFPVDVKHAFMGEGIASGYGFRYPGSKPGSLFVFENGVMAFIWKETRAVLTLQRLNLQELLKKGERVPSLPPVANFSYLTKSYSNVFAGFPSSSNCLSSPREGQH* 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g0840 622 Gene3D - 4 82 - -
Dod09g0840 622 PANTHER F-BOX PROTEIN FAMILY-LIKE 4 619 - -
Dod09g0840 622 PANTHER F-BOX PROTEIN FAMILY-LIKE 4 619 IPR040275 -
Dod09g0840 622 Pfam F-box domain 11 52 IPR001810 GO:0005515
Dod09g0840 622 ProSiteProfiles F-box domain profile. 8 54 IPR001810 GO:0005515
Dod09g0840 622 SMART fbox_2 14 54 IPR001810 GO:0005515
Dod09g0840 622 SUPERFAMILY F-box domain 4 79 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g0840 Dod-Chr9 26641070 26645385 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g0840 - - gmx:100814383 1012.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g2559 04 49489335 49492801 Dod09g0840 09 26641070 26645385 PCT