Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g2559 ATGTTGCCACCTGATCGACGTGATTCAAGCTTGCTTCTTTCTCTTCCTGATGATGTGTTTGCCGGGGTGTCACGGTTCCTCTTGCCCAGAGATGTGTGCAATCTGAGTCTATGCTGCAAGAGTCTCTATGCTCTTGCAGCCTGGGAGAAAGTGTGGCTCACTCAGTGTGACATGGTTGGCATAGTGCCCCTCAAAGACCTTGTTGAGTGGAGAACGGGCATGTCGTCTTACAAGGCACTTTGCCGTTTCCTTCTCAGTGTTCAGCCATTGATTGGGATATGGGTCCATCAGAATCCTGAGCTTGGTAACCTTGTCTATGTCATGCCCGGTTTCATTTCTGTTGTTGGGTGCAGGATTATCCCTCAGGAGCTTGGTCCATTGGGGATTCAAGATGGTCCCATCTTATGGGCTGCTGTGTTTGAAGTTATTGGTGATTTTGATGGTTCACCCACGTTTTTACTCCATGGAAGGGAAAAGGGGGTGGACTATATTTGTCATGGCTCGGTCAAGTATATAAACAAATTTTGCAATGTGCTATTGCTTGAGGTTGAACCCAGGCAACAAGATTATGGTGCTACTTTGGAGAATTCTAGGTTACAAGGAGTGGTTGGAAATAATGAGGCAATGGTTGTTCCCTTCAACAAGTTGGCTTTTAGTGATAGAAGAAAGTTGCTTGACGTCACTACTAGTCAAGTTCGGCAAGAGGTTCCTCATATGGGAATTGGACCCTTGTTTCCTAGGTTACGTGATGACCATGAGAATTTTCAGAAAGATTTGGTGCTCTTGAGGGAAAGAAGAGCACTCCTTAGTCAAATGTACAGGCTTGGTGGTAGTCAGATTGATAATAAGGAACATTCTGAAGAGGCAGCTGATCCAATGCAATTAGAGCAGGATGACACAAGAAAGAGTCTTGAGTGTTCAAGTGCTTTCGCTAGTTCTCTCGACAAGGAGGATGATCATAAGCAAAGCATCAAGAGGAAAAGTCTTGGTGTAAATTTCTGGGGTAGCCTTAAACAGATCCTAGGGAGGTCTAGTTCAAATAGTGGCAGTCATGGAATGTTCAGGAAACATGGTTCAAGCCATGAGACTAAGTATGCCCGGCTTGATGAATTCCTTGGGTCAAGTGACACAATAAGGCTAACTTTAAGGGGCCCAGCTGTAAAATTCTCTTCATATCGAGCATGGCCAAATATGCATGAATCCTGGTTTGCACTTTACAAGATGCCCTTGCGACTTCCCACAGAGGACCAAACTTATGCTGGTTTGTGGGGAGGAACTTTTGGTTGGCCTCCGGGAAAACCTTCTGAGGACAAGCCTGGAAAGGCACTATTCTTTCTTCTGCTCTCTTATGAGGAGTCTCAGGAGCAACAGCTTCTCATTGCAACAAAGATATTGGAAGGCACAAACTATGTCTTGCATCCTAATGGTTCAGCAATGTTTACAGTTAAACTCGATGAGCCTTCATCCGAACCTTTTCCTTGGGGCACTGATGCCGACCCCTTTCCTGTTGATATTAAGCATGCTTTCACTGGAGAGGGCATATCAAATGGTTATGGGTTCAGATACCCTGGATCAAAGCCTGGTTCCCTCTTTGTGTTTCAAAATGATGTCATTGCCTTTGTTTGGAAGGATACAAGGGCTGTTTTGACCTTGCAGAGACTTAACTTGCAAGAACTTTTGAAGAAAGGGGAAAGGGTGCCTTCTCTGCCTCCCATCACCAATTTTTCATATTTGACAAAGTCCTACTCAAATGTGTTTACTGGATTTTCTGACACTTCCGCTTGTTCGCCTTCACCAAGGTTTGCCTTATTCATGACATGTCAGCTTCATTTATATTCCAAAATTTCCACGCTGTCTTTGCCTTATTCTGACACTTCTCTGCTTCATGGTTTGCTTTAA 1899 0.4444 MLPPDRRDSSLLLSLPDDVFAGVSRFLLPRDVCNLSLCCKSLYALAAWEKVWLTQCDMVGIVPLKDLVEWRTGMSSYKALCRFLLSVQPLIGIWVHQNPELGNLVYVMPGFISVVGCRIIPQELGPLGIQDGPILWAAVFEVIGDFDGSPTFLLHGREKGVDYICHGSVKYINKFCNVLLLEVEPRQQDYGATLENSRLQGVVGNNEAMVVPFNKLAFSDRRKLLDVTTSQVRQEVPHMGIGPLFPRLRDDHENFQKDLVLLRERRALLSQMYRLGGSQIDNKEHSEEAADPMQLEQDDTRKSLECSSAFASSLDKEDDHKQSIKRKSLGVNFWGSLKQILGRSSSNSGSHGMFRKHGSSHETKYARLDEFLGSSDTIRLTLRGPAVKFSSYRAWPNMHESWFALYKMPLRLPTEDQTYAGLWGGTFGWPPGKPSEDKPGKALFFLLLSYEESQEQQLLIATKILEGTNYVLHPNGSAMFTVKLDEPSSEPFPWGTDADPFPVDIKHAFTGEGISNGYGFRYPGSKPGSLFVFQNDVIAFVWKDTRAVLTLQRLNLQELLKKGERVPSLPPITNFSYLTKSYSNVFTGFSDTSACSPSPRFALFMTCQLHLYSKISTLSLPYSDTSLLHGLL* 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g2559 632 MobiDBLite consensus disorder prediction 279 301 - -
Dod04g2559 632 ProSiteProfiles F-box domain profile. 9 55 IPR001810 GO:0005515
Dod04g2559 632 PANTHER F-BOX PROTEIN FAMILY-LIKE 5 600 IPR040275 -
Dod04g2559 632 PANTHER F-BOX PROTEIN FAMILY-LIKE 5 600 - -
Dod04g2559 632 SUPERFAMILY F-box domain 6 408 IPR036047 GO:0005515
Dod04g2559 632 SMART fbox_2 15 55 IPR001810 GO:0005515
Dod04g2559 632 Gene3D - 4 83 - -
Dod04g2559 632 MobiDBLite consensus disorder prediction 280 301 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g2559 Dod-Chr4 49489335 49492801 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g2559 - - adu:107480208 914.064
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g2559 04 49489335 49492801 Dod09g0840 09 26641070 26645385 PCT