Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g0823 ATGAAGCTCTGTTTCATTTTCTTGCTGTTTCCTCTCTTCACATTGGCCTTGGGTGCCAATGTCAGCTACGATGGCCGCTCCCTCATCATTGATGGCCAGAGGAAGCTCCTCATCTCTGCTTCCATTCACTACCCTCGAAGTGTTCCTTCGATGTGGCCTAGTCTTGTTCAAACAGCCAAAGAAGGAGGTGCTGATGTGATCGAAACCTATGTTTTCTGGAATGGTCATGAGCTTTCTCCTGGCAATTATTACTTTGGAGGACGATTCGATCTGGTAAAGTTTGTGAGGATTGTCCAGCAGGCTGGAATGTACTTGATTCTTCGAATAGGCCCATTTGTTGCTGCTGAATGGAATTACGGTGGTGTACCAGTATGGTTGCATTATATTCCAGGCACGGTATTCCGGACTTACAATGAGCCTTTTATGTTTCATATGCAGAACTTTACAACATACATAGTGAACCTTATGAAGCAAGAGAAGCTTTTTGCATCACAAGGGGGTCCTATCATCTTATCTCAGATAGAAAATGAATATGGATACTATGAAAGCTTTTATAAAGAGGGAGGTAAGAAATATGCCATGTGGGCTGCAAAGATGGCTGTTTCTCAAAATACAGGTGTGCCTTGGATAATGTGCCAACAATGGGATGCTCCAGATCCTGTGATTGATACTTGTAACTCATTCTACTGTGACCAATTTAAACCTACCTCTCCAAATAGGCCTAAAATTTGGACTGAGAACTGGCCAGGATGGTTTAAAACTTTTGGGGGAAGAGATCCTCACAGGCCACCTGAAGATGTTGCATATTCTGTTGCTCGCTTCTTCCAGAAAGGTGGAAGTGTACAGAATTACTACATGTATCATGGAGGAACAAATTTTGGGCGTACAGCAGGTGGTCCATTCATTACTACAAGTTATGACTATGATGCCCCTATAGATGAGTATGGGCTTCCTAGATTCCCAAAATGGGGCCATCTTAAGCAGCTTCACAGAGCTATCAAATTATGTGAACCTGTATTGCTTCATGGTAAATCAGTTAATATCTCCCTTGGTCCTTCCGTGGAGGCTGATATCTATACTGACTCATCAGGAGCATGTGCTGCCTTTATTGCTAATGTTGATGATAAAAATGATAGGACAGTGGAATTTCGGAATGCATCATATCACCTGCCAGCATGGTCAGTTAGCATTCTTCCTGATTGCAAGAATGTAGTGTTCAACACAGCAAAGGTTGCTTCCCAGACAAATATAGTTTCAATGATAGCTGAGAATTTGCAGCAATCAGGTGTAAAAGCTTTCAAATGGGATGTATTGAAGGAGAACGCAGGGATCTGGGGGCAGGCAGACTTTGTCAAAAGTGGTTTTGTCGATCTCATCAATACCACCAAAGACACCACTGACTACCTGTGGCACACAACAAGCATATTTGTCAGCGAAAATGAAGAGTTCTTAAAGAAGGGAAGCAAGCCAGTTCTTCTAATAGAATCCACGGGTCATGCTCTCCATGCTTTTGTGAATCAGGATTATCAAGGTACTGGAACTGGAAATGGTACACATTCACCTTTTAATTTTACAAATCCTATCACTCTGAGGGCAGGGAAAAATGAAATTGCTTTGTTGTGCTTGACTGTTGGCTTACCGACTGCTGGACCATATTATGACTTCATAGGAGCAGGATTAACAAGTGTAAAGATTAAGGGATTCAACAATGGGACAGTAGACTTGTCTCCTTATGCCTGGACTTACAAGATTGGAGTGCAAGGAGAACACCTAAAGATATTCCAGGGAGGTGGGTTGAGTGGTGTGAACTGGACATCTACTTCAGAACCACCAAAAGGGCAACCATTGACATGGTACAAGGCTGTTGTGGATGCTCCACTTGGGGATGAACCAGTTGGATTGGATATGTCACAAATGGGAAAAGGTCTAGCCTGGTTAAATGGAGAAGAAATTGGAAGATATTGGTCTAGGAAAAGTGAGTTCAAGGAGAAACATTGTGTTCAGGAATGTGACTACAGAGGCAAATTCAATCCTGACAAATGTGACACTGGTTGTGGAAAACCTACACAGAAATGGTACCATGTTCCACGGTCTTGGCTCAAGCCATCTGGAAATATTCTTGTTATTTTTGAGGAGAAAGGTGGAGATCCAACAAAAATTACATTCCTAAGACGTAAAGTATCTGGAGTATGCGCCCTTGTTGCGGAGGATTACCCCTCTGATGGACTTGATCCTCAGGGTGAAGAAAAAATAGGGAATAGCAATAACACTCCTCTTGCTCATTTAACGTGCCCTGGCAACAAATTAATATCTGCTGTAAAATTTGCTAGCTTTGGAACCCCTACTGGAACATGTGGATCTTACTTGAAGGGAGATTGCCATGATCCCAATACTAGCACAGTTGTTGAAAAGGCATGTATTTTTGCAATTTATTTTGTTTTGCATTTGAATTGTTGTCTCTACATAACCACTCTACTGAGGTTTTCATTTTCAAAATTAGCTACACAAGTAAGGGATGTCATGATTCCTCTGGGTTTGTGGTTTACTGTATAA 2553 0.4195 MKLCFIFLLFPLFTLALGANVSYDGRSLIIDGQRKLLISASIHYPRSVPSMWPSLVQTAKEGGADVIETYVFWNGHELSPGNYYFGGRFDLVKFVRIVQQAGMYLILRIGPFVAAEWNYGGVPVWLHYIPGTVFRTYNEPFMFHMQNFTTYIVNLMKQEKLFASQGGPIILSQIENEYGYYESFYKEGGKKYAMWAAKMAVSQNTGVPWIMCQQWDAPDPVIDTCNSFYCDQFKPTSPNRPKIWTENWPGWFKTFGGRDPHRPPEDVAYSVARFFQKGGSVQNYYMYHGGTNFGRTAGGPFITTSYDYDAPIDEYGLPRFPKWGHLKQLHRAIKLCEPVLLHGKSVNISLGPSVEADIYTDSSGACAAFIANVDDKNDRTVEFRNASYHLPAWSVSILPDCKNVVFNTAKVASQTNIVSMIAENLQQSGVKAFKWDVLKENAGIWGQADFVKSGFVDLINTTKDTTDYLWHTTSIFVSENEEFLKKGSKPVLLIESTGHALHAFVNQDYQGTGTGNGTHSPFNFTNPITLRAGKNEIALLCLTVGLPTAGPYYDFIGAGLTSVKIKGFNNGTVDLSPYAWTYKIGVQGEHLKIFQGGGLSGVNWTSTSEPPKGQPLTWYKAVVDAPLGDEPVGLDMSQMGKGLAWLNGEEIGRYWSRKSEFKEKHCVQECDYRGKFNPDKCDTGCGKPTQKWYHVPRSWLKPSGNILVIFEEKGGDPTKITFLRRKVSGVCALVAEDYPSDGLDPQGEEKIGNSNNTPLAHLTCPGNKLISAVKFASFGTPTGTCGSYLKGDCHDPNTSTVVEKACIFAIYFVLHLNCCLYITTLLRFSFSKLATQVRDVMIPLGLWFTV* 851
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g0823 850 ProSiteProfiles SUEL-type lectin domain profile. 754 806 IPR000922 GO:0030246
Dod09g0823 850 PRINTS Glycosyl hydrolase family 35 signature 243 258 IPR001944 GO:0004553|GO:0005975
Dod09g0823 850 PRINTS Glycosyl hydrolase family 35 signature 107 126 IPR001944 GO:0004553|GO:0005975
Dod09g0823 850 PRINTS Glycosyl hydrolase family 35 signature 164 179 IPR001944 GO:0004553|GO:0005975
Dod09g0823 850 PRINTS Glycosyl hydrolase family 35 signature 641 657 IPR001944 GO:0004553|GO:0005975
Dod09g0823 850 PRINTS Glycosyl hydrolase family 35 signature 614 628 IPR001944 GO:0004553|GO:0005975
Dod09g0823 850 PRINTS Glycosyl hydrolase family 35 signature 31 48 IPR001944 GO:0004553|GO:0005975
Dod09g0823 850 PRINTS Glycosyl hydrolase family 35 signature 280 295 IPR001944 GO:0004553|GO:0005975
Dod09g0823 850 PRINTS Glycosyl hydrolase family 35 signature 52 70 IPR001944 GO:0004553|GO:0005975
Dod09g0823 850 PRINTS Glycosyl hydrolase family 35 signature 300 316 IPR001944 GO:0004553|GO:0005975
Dod09g0823 850 SUPERFAMILY (Trans)glycosidases 18 337 IPR017853 -
Dod09g0823 850 Pfam Beta-sandwich domain in beta galactosidase 340 411 IPR041392 -
Dod09g0823 850 Gene3D Glycosidases 17 337 - -
Dod09g0823 850 PANTHER BETA-GALACTOSIDASE RELATED 14 807 IPR001944 GO:0004553|GO:0005975
Dod09g0823 850 Gene3D - 599 731 - -
Dod09g0823 850 SUPERFAMILY Galactose-binding domain-like 580 741 IPR008979 -
Dod09g0823 850 SUPERFAMILY Galactose-binding domain-like 395 559 IPR008979 -
Dod09g0823 850 PANTHER BETA-GALACTOSIDASE 10 14 807 - -
Dod09g0823 850 Pfam Glycosyl hydrolases family 35 27 332 IPR031330 -
Dod09g0823 850 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 166 178 IPR019801 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g0823 Dod-Chr9 26159811 26172092 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g0823 3 730 Glycoside Hydrolase AT5G63810 70.411 0.0 1102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g0823 - - gmx:100815037 1513.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod09g0823 09 26159811 26172092 Dod09g0823 09 26159811 26172092 ECH
Dod02g0427 02 5683686 5688710 Dod09g0823 09 26159811 26172092 ECH