Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g0427 ATGCTAACCACAGGTAGAGGCTTGTTGTTCACGGCACTTGTTGCACTGTTCGTTCATATAGTTGTTGGCCATGGTGCACAGAATGGTGTGACTTATGATGGGAAGTCACTGATCATCAATGGCAAAAGGATGCTTCTCTTCTCCGGTTCAATTCATTATCCTCGTAGTCCTCCAGAGATGTGGCCAGACATTTTAAATAAAGCCAAAAAAGGAGGGCTCAATGTGATTCAGACTTATATTTTTTGGAACATTCACGAACCAGTGCAGGGCCAACAGTACAATTTTGAAGGAAATTATGATATTGTTAAATTTATAAAGATGATTGGGGAGCATAATATGTATGCAACACTTAGAATTGGGCCATTCATTGAGGCTGAATGGAATTATGGAGGATTGCCAGTATGGTTAAGAGATATTCCCAACATTATTTTCAGATCAGATAATCAACCTTTCATGTACTACATGGAAAAGTTCACCAAAATGATCGTAGAAAAGATGACGGATGAGAAGCTTTTTTCCTCTCAAGGAGGTCCTATTATTTTGTCACAGATTGAAAATGAATACGCCACTGTTGAAGCGGCATACAAAGAACTTGGGACCCGGTATGTCCGTTGGGCAGGAGACATGGCCGTGGGGCTAGATACTGGAGTTCCATGGATTATGTGCAAGCAATCAGATGCCCCAGGTCCAGTGATAAATACTTGCAATGGAAGGAACTGTGGAGATACATTTGTTGGCCCTAACGGCCCAAATAAACCAACTTTGTGGACTGAGAATTGGACGGCTCAGTATAGAGCATTTGGAGACCCCCCATCTGAAAGAACTGCTGAAGACATTGCATTCTCCGTTGCTCGTTTCTTCTCTAAGAATGGCACTCTTGCTAACTATTATATGTATTATGGTGGTACAAATTTTGGTAGAACAGCAGCATCTTTTATAACAACTCAGTACTATGATGAGGCTCCTCTTGATGAATATGGTCTGCCGAAGGAACCAAAATGGGGTCACTTGCAACACTTGCATGCTGCTCTGAAACTTAGCCAGAAAGCTTTGCTATGGGGAACTCCATCGGTGAAAAAGTTCAATGATGACTTAGAGGGTCGAGCTTATGAGGGGACAGGAAACACATGCGCTGCTTTCTTGTCCAACAACAACACTCTATTGCCTGCAACTGTGGAATTCAGAGGTGCCAAATACTACCTTCCCCCACGTTCCATAAGCATACTTCCCGATTGCAAAACGGTTGTCTACAACACGCAAATGGTAATTGTTTCACAACACAATGAAAGAAGCTACAAGAAATCAGACGTTGCTAACAATCTCCAATGGACAATGGTCAAAGAGACTATTCCTACTCCAAATACTTCTCCACTCAAATCAATGGAGCCTTTAGAGCACTTCCACACAACCAAGGATGCATCTGATTATCTATGGTTTACGACAAGGCAAGATGGAATTGCAAACTGCAGGAGGGTGCTTTATTTATGCCTTTGTTCAATCTCTCAATTTTGTACTGTTATTGTAGGATCTGGGAATGGAAACAACAATGAAAAGGATTTTGTCTTCAGAGAAGAAATATCCTTGAGGCCAGGAGTTAATAACATATCAATCCTGGGGGCAACTGTTGGATTCCCTGATAGTGGATCCTACTTGGAGCACAGGGTTGCCGGTGTCCGAACCGTGTCACTGCATGGCCTTAAGACTGATACTCTTGATCTGACATACAATGGATGGGGGCATAAGGTAGGCTTAGACGGTGAAAAACACAACATTTTCACAGAGCAGGGTTCTCACAGCTTTCAGTGGACCAAAGTTGACAAGGGACCAACTCCTGCTCTTTCATGGTACAAGGCTAACTTCGATGCACCCGAAGGACATGACCCTGTTGCCATTGAAATGGAAACTATGTCCAAAGGCATGGTTTGGGTGAACGGGAAAAGCATCGGCCGTTACTGGGCATCATGCCTTTCTCCTCTGGGAGATCCTAGTCAATCCGTGTATCACATTCCAAGGGCGTTCTTGAAGCCAAAGGGAAATCTTATTGTTGTACTAGAGGAAATGAGAGGGAACCTAGAGGGTATCATGATCCAAACGGTGAATAGAGATACAATTTGCAGCATAATAAGGGAAGATTATCCACCAAATGTACAGACATGGAGGAGACAGCAGAATGTGGTAAGCACCAACGTGAACAGTCCAAAACCAACAGCAAACTTGGCGTGTCCTGACAACAAAACGATTGATCGTGTGAACTTTGCAAGCTATGGTGATCCAGTAGGCAACTGTGGACATCTCTTCCTAGGAAAGTGCACTTCACCGGATAGCCAGAAAGTGGTGGAACAGTATTGTTTGGGAAAGACAAGGTGTGCTGTGCCCCTGGACAAGAATATATTTGATAAGGAAGGAAAAATTTGTCCAGGGAGCCTAAAGACGCTTGCCATTCAAGCACACTGTGGTCACGAGAATATGCATCTCCATATGCAAACCTGA 2490 0.4341 MLTTGRGLLFTALVALFVHIVVGHGAQNGVTYDGKSLIINGKRMLLFSGSIHYPRSPPEMWPDILNKAKKGGLNVIQTYIFWNIHEPVQGQQYNFEGNYDIVKFIKMIGEHNMYATLRIGPFIEAEWNYGGLPVWLRDIPNIIFRSDNQPFMYYMEKFTKMIVEKMTDEKLFSSQGGPIILSQIENEYATVEAAYKELGTRYVRWAGDMAVGLDTGVPWIMCKQSDAPGPVINTCNGRNCGDTFVGPNGPNKPTLWTENWTAQYRAFGDPPSERTAEDIAFSVARFFSKNGTLANYYMYYGGTNFGRTAASFITTQYYDEAPLDEYGLPKEPKWGHLQHLHAALKLSQKALLWGTPSVKKFNDDLEGRAYEGTGNTCAAFLSNNNTLLPATVEFRGAKYYLPPRSISILPDCKTVVYNTQMVIVSQHNERSYKKSDVANNLQWTMVKETIPTPNTSPLKSMEPLEHFHTTKDASDYLWFTTRQDGIANCRRVLYLCLCSISQFCTVIVGSGNGNNNEKDFVFREEISLRPGVNNISILGATVGFPDSGSYLEHRVAGVRTVSLHGLKTDTLDLTYNGWGHKVGLDGEKHNIFTEQGSHSFQWTKVDKGPTPALSWYKANFDAPEGHDPVAIEMETMSKGMVWVNGKSIGRYWASCLSPLGDPSQSVYHIPRAFLKPKGNLIVVLEEMRGNLEGIMIQTVNRDTICSIIREDYPPNVQTWRRQQNVVSTNVNSPKPTANLACPDNKTIDRVNFASYGDPVGNCGHLFLGKCTSPDSQKVVEQYCLGKTRCAVPLDKNIFDKEGKICPGSLKTLAIQAHCGHENMHLHMQT* 830
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g0427 829 Gene3D - 720 825 IPR043159 -
Dod02g0427 829 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 176 188 IPR019801 GO:0004553|GO:0005975
Dod02g0427 829 ProSiteProfiles SUEL-type lectin domain profile. 731 819 IPR000922 GO:0030246
Dod02g0427 829 PANTHER BETA-GALACTOSIDASE RELATED 13 816 IPR001944 GO:0004553|GO:0005975
Dod02g0427 829 Gene3D Glycosidases 26 348 - -
Dod02g0427 829 Pfam Glycosyl hydrolases family 35 36 343 IPR031330 -
Dod02g0427 829 Gene3D - 584 711 - -
Dod02g0427 829 PRINTS Glycosyl hydrolase family 35 signature 292 307 IPR001944 GO:0004553|GO:0005975
Dod02g0427 829 PRINTS Glycosyl hydrolase family 35 signature 611 625 IPR001944 GO:0004553|GO:0005975
Dod02g0427 829 PRINTS Glycosyl hydrolase family 35 signature 40 57 IPR001944 GO:0004553|GO:0005975
Dod02g0427 829 PRINTS Glycosyl hydrolase family 35 signature 61 79 IPR001944 GO:0004553|GO:0005975
Dod02g0427 829 PRINTS Glycosyl hydrolase family 35 signature 174 189 IPR001944 GO:0004553|GO:0005975
Dod02g0427 829 PRINTS Glycosyl hydrolase family 35 signature 255 270 IPR001944 GO:0004553|GO:0005975
Dod02g0427 829 PRINTS Glycosyl hydrolase family 35 signature 117 136 IPR001944 GO:0004553|GO:0005975
Dod02g0427 829 PRINTS Glycosyl hydrolase family 35 signature 638 654 IPR001944 GO:0004553|GO:0005975
Dod02g0427 829 PRINTS Glycosyl hydrolase family 35 signature 311 327 IPR001944 GO:0004553|GO:0005975
Dod02g0427 829 Pfam Galactose binding lectin domain 739 818 IPR000922 GO:0030246
Dod02g0427 829 PANTHER BETA-GALACTOSIDASE 14 13 816 - -
Dod02g0427 829 SUPERFAMILY Galactose-binding domain-like 575 723 IPR008979 -
Dod02g0427 829 Coils Coil 181 201 - -
Dod02g0427 829 SUPERFAMILY (Trans)glycosidases 28 347 IPR017853 -
Dod02g0427 829 Pfam Beta-sandwich domain in beta galactosidase 351 422 IPR041392 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g0427 Dod-Chr2 5683686 5688710 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g0427 30 821 Glycoside Hydrolase AT2G16730 53.629 0.0 901
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g0427 - - egr:104419643 1083.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g0427 02 5683686 5688710 Dod02g0427 02 5683686 5688710 ECH
Dod02g0427 02 5683686 5688710 Dod09g0823 09 26159811 26172092 ECH