Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g0822 ATGTTGGAGATGGAAAAGTGGGTGGCTTTGGTGCTGGTGCTGATGGTGTCATTGACATCAATGGAAGAATTTGGCGTTAAAGCAGAACAAGTCACATATGATGGAAGATCTCTAATCATCGATGGCCAGCGAAAAATTCTCTTCTCGGGTTCAATTCACTATCCTCGCAGCACTCCTCTGATGTGGCCAGATTTGATAGCGAAAGCAAAACAAGGAGGACTGGACGTGATCCAGACCTATGTGTTCTGGAATCTACATGAGCCCCAACCTGGACAGTATGATTTCAGCGGGAGATATGACTTGGTAAGATTCATAAAGGAAATCCAGGCTCAAGGGCTGTATGTTTGCTTGAGGATTGGACCTTTCATCGAGAGTGAATGGACATACGGGGGATTCCCATTTTGGCTACATGATGTCCCTGGCATCGTCTACCGAACGGACAATGAGCCATTCAAGTTCTACATGCAAAATTTCACGACAAAAATCGTGAACATGATGAAAGAAGAGGGCTTATATGCTTCGCAAGGAGGCCCAATTATATTGTCGCAGATTGAGAATGAGTATCAAAATGTTGAGAAGGCATTCGGCACAGCAGGGCTGCGCTATGTCCAATGGGCTGCAAAAATGGCAGTGGGCCTTCAAACAGGAGTGCCATGGATTATGTGCAAGCAAATGGACGCTCCTGATCCTATGATCAATACATGCAATGGCATGAAATGTGGAGAAACCTTCACCGGACCTAACTCCCCCAATAAGCCCAATATGTGGACTGAAAATTGGACATCCTTCTATCAAGTGTACGGTGGATTGCCATACATAAGGTCTGCTGAAGACATTGCATTTCACGTCACTCTTTTTATTGCAAGAAATGGAAGCTACGTCAACTATTACATGTACCATGGTGGAACTAACTTTGGCAGAACGGCCTCTGCTTATGTTATAACAGCGTATTATGATCAAGCCCCACTCGATGAATATGGCTTGTTGAGGCAACCCAAGTGGGGACATCTTAAGGGGTTGCATGCTGCAATCAAGTCTTGCTCTACAACTTTATTGCAAGGAGTGCAGAGGAACTTCTCTTTAGGTCCACTGCAGGAGGGTTTTGTTTTTGAAGAAGAAAATGGAGCATGTGTTGCATTCCTCATAAACAATGATACAAGGAATAAGGTTACTGTGCAATTCCGCAACATATCATACGAATTGCTCCCTAAGTCAATAAGTATCTTGCCAGATTGTCAAAATGTGACTTTCAATACTGCTAATGTAAGTACAACAAGCAACAGAAGAATCATGAGTCCTAGGCAAAACTTCAGCTCAGTGAATGATTGGGAGCAATTTCAAGATGTCATCCCAAACTTCGATGACACCTCTCTAAGATCAAACTCATTACTTGAACAAATGAATACAACCAAAGACAAATCGGATTACCTTTGGTATACTACTAGGTTTGAATATAACTTATCTTGCAGTGAACCAACACTTGTTGTTCAGTCCATGGCTCATGTTGCACATGCTTTTGTGAACAACACCTACATAGGTGCGGCACATGGAAATCATGATGTGAAGTCATTCACCTTAGAGCTACCGGTTACAGTAAATGAAGGGACAAACAATCTTTCTATACTAAGCGTTATGGTTGGTCTACCGGACTCGGGGGCATTTCTTGAAAGAAGATTTGCTGGCTTAACAAGCGTGGAACTTCAGTGCAGCCAAGAAGAGTTCCTTAATTTAACCAATTCTACCTGGGGATACCAGGTTGGACTGTTGGGGGAGCAATTAGAAGTATATAAAGAACAAAATAGTATTGATGTTGAGTGGAATCAACTGGGGAATATTACAGATCAGACGCTCATTTGGTACAAGACTACATTTGACACACCGGAGGGTGATGACCCTGTTGCCTTGGATCTAAGCTCGATGGGAAAAGGTGAAGCTTGGGTAAATGGACAAAGCATTGGTCGGTATTGGATCTTATTCCATGATTCCAAAGGCAACCCTTCTCAATCACTGTATCATGTGCCACGGTCTTTCCTTAAAGACACGACAGGAAACGTTTTGGTTCTGGTGGATGAAGGTGGTGGGAATCCCCTTGATATGTCATTGGACAGTGTTACAGTCGCTAACTTACAAGAAAATTTATCTAAATTATCATTCCCAACCTCTGCTTAA 2169 0.4283 MLEMEKWVALVLVLMVSLTSMEEFGVKAEQVTYDGRSLIIDGQRKILFSGSIHYPRSTPLMWPDLIAKAKQGGLDVIQTYVFWNLHEPQPGQYDFSGRYDLVRFIKEIQAQGLYVCLRIGPFIESEWTYGGFPFWLHDVPGIVYRTDNEPFKFYMQNFTTKIVNMMKEEGLYASQGGPIILSQIENEYQNVEKAFGTAGLRYVQWAAKMAVGLQTGVPWIMCKQMDAPDPMINTCNGMKCGETFTGPNSPNKPNMWTENWTSFYQVYGGLPYIRSAEDIAFHVTLFIARNGSYVNYYMYHGGTNFGRTASAYVITAYYDQAPLDEYGLLRQPKWGHLKGLHAAIKSCSTTLLQGVQRNFSLGPLQEGFVFEEENGACVAFLINNDTRNKVTVQFRNISYELLPKSISILPDCQNVTFNTANVSTTSNRRIMSPRQNFSSVNDWEQFQDVIPNFDDTSLRSNSLLEQMNTTKDKSDYLWYTTRFEYNLSCSEPTLVVQSMAHVAHAFVNNTYIGAAHGNHDVKSFTLELPVTVNEGTNNLSILSVMVGLPDSGAFLERRFAGLTSVELQCSQEEFLNLTNSTWGYQVGLLGEQLEVYKEQNSIDVEWNQLGNITDQTLIWYKTTFDTPEGDDPVALDLSSMGKGEAWVNGQSIGRYWILFHDSKGNPSQSLYHVPRSFLKDTTGNVLVLVDEGGGNPLDMSLDSVTVANLQENLSKLSFPTSA* 723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g0822 722 PANTHER BETA-GALACTOSIDASE RELATED 27 716 IPR001944 GO:0004553|GO:0005975
Dod09g0822 722 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 176 188 IPR019801 GO:0004553|GO:0005975
Dod09g0822 722 Gene3D - 588 710 - -
Dod09g0822 722 SUPERFAMILY Galactose-binding domain-like 406 562 IPR008979 -
Dod09g0822 722 PRINTS Glycosyl hydrolase family 35 signature 117 136 IPR001944 GO:0004553|GO:0005975
Dod09g0822 722 PRINTS Glycosyl hydrolase family 35 signature 311 327 IPR001944 GO:0004553|GO:0005975
Dod09g0822 722 PRINTS Glycosyl hydrolase family 35 signature 292 307 IPR001944 GO:0004553|GO:0005975
Dod09g0822 722 PRINTS Glycosyl hydrolase family 35 signature 615 629 IPR001944 GO:0004553|GO:0005975
Dod09g0822 722 PRINTS Glycosyl hydrolase family 35 signature 174 189 IPR001944 GO:0004553|GO:0005975
Dod09g0822 722 PRINTS Glycosyl hydrolase family 35 signature 255 270 IPR001944 GO:0004553|GO:0005975
Dod09g0822 722 PRINTS Glycosyl hydrolase family 35 signature 642 658 IPR001944 GO:0004553|GO:0005975
Dod09g0822 722 PRINTS Glycosyl hydrolase family 35 signature 41 58 IPR001944 GO:0004553|GO:0005975
Dod09g0822 722 PRINTS Glycosyl hydrolase family 35 signature 62 80 IPR001944 GO:0004553|GO:0005975
Dod09g0822 722 Gene3D - 442 580 - -
Dod09g0822 722 PANTHER BETA-GALACTOSIDASE 6 27 716 - -
Dod09g0822 722 SUPERFAMILY (Trans)glycosidases 30 347 IPR017853 -
Dod09g0822 722 SUPERFAMILY Galactose-binding domain-like 581 712 IPR008979 -
Dod09g0822 722 Pfam Beta-galactosidase jelly roll domain 613 690 IPR025300 -
Dod09g0822 722 Pfam Glycosyl hydrolases family 35 37 343 IPR031330 -
Dod09g0822 722 Pfam Beta-sandwich domain in beta galactosidase 351 422 IPR041392 -
Dod09g0822 722 Gene3D Glycosidases 27 348 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g0822 Dod-Chr9 26125201 26132394 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g0822 2 706 Glycoside Hydrolase AT5G63800 63.470 0.0 966
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g0822 - - gmx:100818637 1308.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod09g0822 09 26125201 26132394 Dod09g0822 09 26125201 26132394 ECH
Dod04g2569 04 49594452 49602780 Dod09g0822 09 26125201 26132394 ECH