Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g2569 ATGGAAAAGTGGCTTCGTTTGGTTATTGTGCTAGTGTCTTTGACATTCGAAATAGGAGCTACTGGGATTGAAGCAGCAGAGATCACATATGATGGAAGATCTCTTATCATTGATGGCCACAGGAAAATCATCTTCTCTGGTTCCATTCACTATCCTCGTAGCACTCCTCAGATGTGGCCAGCGTTGATAGCGAAAGCAAAAGAAGGAGGGCTGGACGTGATTCAGACCTATGTGTTTTGGAATTTGCATGAACCCCAACCCGGACAATATGATTTCAGCGGCAGATATGACTTGGTGAGATTTATAAAGGAAATCCAAGCTCAAGGGCTGTATGTGTGCCTCAGGATTGGACCTTATATCGAAAGTGAATGGACATACGGGGGATTCCCATTTTGGTTACATGATGTCCCAGGCATTGTCTACCGAACTGACAATGAACCATTCAAGTACTACATGCAAAACTTCACGACGAAAATAGTGAGCATGATGCAATCAGAGGGCTTATATGCTTCTCAAGGAGGTCCAATTATATTGTCCCAGATTGAGAATGAATATCAAAACATCCAACATTCCTTTGGAGAAGATGGATCTGGGTATGTTGGGTGGGCTGCAGAGATGGCTGTGGGCCTAAAGACTGGAGTACCATGGGTTATGTGCAAGCAAACTGACGCTCCTGATCCAGTGATAAATACATGCAATGGAATGAGATGTGGAGAAACTTTTACTGGACCAAATTCCCCCAATAAGCCTGCACTGTGGACAGAGAATTGGACCTCTTTCTATCAAGTTTATGGTGGTGAGCCATACATAAGGTCTGCAGAAGACATTGCATTTCATGTCACTCTTTTTATTGCAAGAAAAAATGGAAGCTATGTGAACTACTATATGTACCATGGAGGAACTAACTTCGGGAGAAAAGGCTCTGCCTATGTTATAACATCCTATTATGATCAAGCTCCACTTGATGAATATGGTCTATTAAGGCAACCCAAGTGGGGACATCTCAGGGAGTTGCATGCTGCAATCAAGTCTTGTTCTAACACCTTATTGCAAGGAATGCAGACAAATTTATCCTTAGGTCGGCTGCAGGAGGGTTATGTTTTTGAAGAAGAAGGACGAGGATGTGCTGCTTTCCTTGTAAACAATGATGGTGTAAATAAGGTTACAGTCCAATTCCGAAACGGATTATATGAATTGCCGCCGAAGTCAATGAGTATCCTACCAGATTGTCAAAATGTGACTTTCAATACTGCAACTGTAAATACAAATAGCAACAGAAGAATCATAAATCCGGTACAAACCTTCAGCTCAGCGAATAAATGGGAGCAAGTGCAAGATGTCATCCCAAACTTTGACGACACTTGGTTAATATCAGACGCACTACTTGAGCATATGAACCTAACCAAAGACACATCGGATTACCTTTGGTATACTCTTAGGTTTGAACATAATTTGCCTTGCAGTGAACCGATACTTCATGCTGAGTCAGCTGCTCATGTTGCCCATGCTTTCGTGGATGATGAATACATAGGAGGGGCACATGGAAGTCACAATGTGAAGTCATTCATCTTGGAGGTCCCCGTTACACTAGAAGAAGGGACAAGCAATATTTCTATACTCAGCGTTATGGTTGGACTCCCGGATTCAGGGGCACTCCTAGAAAGCAGATTTGCTGGTTTAACCACAGTGGAAATTCGGTGTAGCGAAGGGTCCTATGATTTGACCAATGCTACGTGGGGATATCAGGTTGGTTTACTAGGAGAGAAACTACAAATCTATGAACAAAATAGCAATTCTATAGAATGGTATCAGCTAACGAATCCTACTAATCAGACTCTCATTTGGTACAAGACTGTATTTGATTCACCTGAGGGAGATGAGCCTGTTGCATTGGACCTTGGGTCGATGGGAAAAGGTGAAGCTTTTGTGAATGGACAGAGCATTGGTCGCTATTGGATCTCGTTTCGTGATTCCAATGACCAGCCTTCTCAAACTCTGTATCACGTGCCACGGTCGTTCCTTAAAGACACCGGGAACATTTTGGTTTTGTTTGAGGAGGGCGGTGGGAATCCTCTTGACATCTGCCGTCAACACTGTTTCAGTTTCATCCACAATTGTGAATGA 2124 0.4298 MEKWLRLVIVLVSLTFEIGATGIEAAEITYDGRSLIIDGHRKIIFSGSIHYPRSTPQMWPALIAKAKEGGLDVIQTYVFWNLHEPQPGQYDFSGRYDLVRFIKEIQAQGLYVCLRIGPYIESEWTYGGFPFWLHDVPGIVYRTDNEPFKYYMQNFTTKIVSMMQSEGLYASQGGPIILSQIENEYQNIQHSFGEDGSGYVGWAAEMAVGLKTGVPWVMCKQTDAPDPVINTCNGMRCGETFTGPNSPNKPALWTENWTSFYQVYGGEPYIRSAEDIAFHVTLFIARKNGSYVNYYMYHGGTNFGRKGSAYVITSYYDQAPLDEYGLLRQPKWGHLRELHAAIKSCSNTLLQGMQTNLSLGRLQEGYVFEEEGRGCAAFLVNNDGVNKVTVQFRNGLYELPPKSMSILPDCQNVTFNTATVNTNSNRRIINPVQTFSSANKWEQVQDVIPNFDDTWLISDALLEHMNLTKDTSDYLWYTLRFEHNLPCSEPILHAESAAHVAHAFVDDEYIGGAHGSHNVKSFILEVPVTLEEGTSNISILSVMVGLPDSGALLESRFAGLTTVEIRCSEGSYDLTNATWGYQVGLLGEKLQIYEQNSNSIEWYQLTNPTNQTLIWYKTVFDSPEGDEPVALDLGSMGKGEAFVNGQSIGRYWISFRDSNDQPSQTLYHVPRSFLKDTGNILVLFEEGGGNPLDICRQHCFSFIHNCE* 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g2569 707 SUPERFAMILY Galactose-binding domain-like 404 560 IPR008979 -
Dod04g2569 707 PANTHER BETA-GALACTOSIDASE 6 26 695 - -
Dod04g2569 707 Gene3D Glycosidases 25 346 - -
Dod04g2569 707 PRINTS Glycosyl hydrolase family 35 signature 611 625 IPR001944 GO:0004553|GO:0005975
Dod04g2569 707 PRINTS Glycosyl hydrolase family 35 signature 638 654 IPR001944 GO:0004553|GO:0005975
Dod04g2569 707 PRINTS Glycosyl hydrolase family 35 signature 114 133 IPR001944 GO:0004553|GO:0005975
Dod04g2569 707 PRINTS Glycosyl hydrolase family 35 signature 59 77 IPR001944 GO:0004553|GO:0005975
Dod04g2569 707 PRINTS Glycosyl hydrolase family 35 signature 290 305 IPR001944 GO:0004553|GO:0005975
Dod04g2569 707 PRINTS Glycosyl hydrolase family 35 signature 252 267 IPR001944 GO:0004553|GO:0005975
Dod04g2569 707 PRINTS Glycosyl hydrolase family 35 signature 171 186 IPR001944 GO:0004553|GO:0005975
Dod04g2569 707 PRINTS Glycosyl hydrolase family 35 signature 38 55 IPR001944 GO:0004553|GO:0005975
Dod04g2569 707 PRINTS Glycosyl hydrolase family 35 signature 309 325 IPR001944 GO:0004553|GO:0005975
Dod04g2569 707 SUPERFAMILY Galactose-binding domain-like 578 695 IPR008979 -
Dod04g2569 707 Pfam Glycosyl hydrolases family 35 34 341 IPR031330 -
Dod04g2569 707 PANTHER BETA-GALACTOSIDASE RELATED 26 695 IPR001944 GO:0004553|GO:0005975
Dod04g2569 707 Pfam Beta-sandwich domain in beta galactosidase 349 420 IPR041392 -
Dod04g2569 707 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 173 185 IPR019801 GO:0004553|GO:0005975
Dod04g2569 707 Gene3D - 578 704 - -
Dod04g2569 707 SUPERFAMILY (Trans)glycosidases 27 345 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g2569 Dod-Chr4 49594452 49602780 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g2569 7 694 Glycoside Hydrolase AT5G63800 64.306 0.0 940
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g2569 - - gmx:100782510 1175.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g2569 04 49594452 49602780 Dod04g2569 04 49594452 49602780 ECH
Dod04g2569 04 49594452 49602780 Dod09g0822 09 26125201 26132394 ECH