Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g0290 ATGCCGGGAATTACTGGGAACGGAGTTCATGATGATGGTGGAGCTAATGATATGAATGGGAACTGGTCCACCTCTAAGGAAAACTCGACTTCTATCAAGTCCCCAAGGAATTCCCCGAGTCCTCCAAGACGAGAAGGTGATGGTCCCGATCATGATGGGGTGGTCGAGCACTCGATTGAACAGCTGTATGAAAATGTCTGTGACATGCAGAGTTCTGATCGGTCACCATCAAGGCAAAGTTATGGATCTGATGGCGATGAGTCTAGAATTGATTCTGAGTTGCACCATCTAGTTGGAGGACGGATGAGGGAGGTCGAGATAATGGAAGAGGAAGTGGAAGAGGAAAAGAGGCCGGGAGGTAACTCGAGTTGTGAAATGTCTACTGGGGCAGGTAGTTCATCGAATGATAAGAAGTTGGATAAGGTGGATGAGATCCGACCTGCAACTGGAAGTTCTGTTTCTTCAGAAAAATCAGTCAAAGCGTCAAACTCACAGTTGGGCTCTGAAACTGCACCAAAATCAAAACCCAAGGGAAAAAGTCCTGCAAAAGCTCCTGCTGAGAGAAAGAGTGATAAGCCTTTGAGGAAACAAGTTAAAGGAGTTGCTGCCGTGAAGAAATCAAAGAATTCTCCATTGGGAAAGTCTGTTTTGCATAGCCAAGTCGATAATTCAGCTGATTCAGGGGTAGATAAACTGGAACGGGCACCAATATTACTAAAGCAAGCAAGAGATCTGATTTCATCAGGAGATAATCCACAGAAAGCTCTTCAATTAGCCCTTCAAGCATTGAAACTGTTTGAGAAGTTTGGTGATGGGAAACCGAGTTTGGAACTGGTTATGTGTTTACATGTTACGGCAGCAATATATTGCAATTTGGGTCGATATGATGAGGCAATTCCAATGCTTGAGCGCTCAATTGAGATTCCTGTTATTGAGGAAGGCCAACAGCATGCTCTTGCTAAATTTGCCGGTCACATGCAGCTGGGTGACACCTATGCAATGCTGGGCCAGCTTGAGAATTCAATTATGTGCTACACAACAGGGTTCGAAATCCAGAGGCAGGTTTTGGGAGAAACTGACCCAAGAGTTGGTGAAACTTGTCGGTATGTGGCCGAGGCTAATGTTCAGGCTTTGCAATTTGATGAAGCAGAGAGGCTCTGCCAAATAGCTCTTGACATTCATAAAGCAAATAGTTCAGCCCCATCTCTTGAAGAGGCAGCTGATAGGAGGCTCATGGGCCTTATATGTGAAACAAAGGGTAATCATGAAGTAGCTCTTGAGCATCTTGTTTTAGCTAGCATGGCAATGGTAGGAAATGGCCAGGAAGAAGAAGTGGCGGCAGTTGACTGCAGCATTGGAGACACATACTTGTCCTTGTCTCGTTACGATGAGGCTGTTTTTGCATATCAAAAAGCATTAACAGTTTTCAAGAGCAGCAAAGGAGAGAATCATCCGAATGTGGGGTCAGTCTTTGTACGTCTGGCTGACTTGTATAACAGGACGGGTAAGATGAGGGATTCAAAATCGTATTGTGAGAGTGCACTTAGAATATATGAGAATCCCATGCCTGGAGTTCCTCCAGAGGAGATTGCTAGTGGTCTTACAAATGTTTCTACTATCTATGAGTCAATGAATGAGCTTGAACAGGCACTCAAGTTACTGAAGAAGGCACTGGACATATATGATGATGCCCCTGGTCAACAAAGCACAATCGCCGGGATTGAAGCTCAGATGGGGGTAATGTACTACATGTTGGGGAACTACACTGAATCTTACAACACTTTGAAGAATGCTATCTCAAAGTTCCGTGCTCTTGGAGAGAAGAAATCAGCCTTCTTTGGTATTGCTCTTAATCAAATGGGACTTGCTTGTGTGCAGCGTTATGCCTTAACTGAGGCTACAACATTATTTGAAGAAGCAAAAGATATTTTGGAACATGAGTATGGACCATATCACCCTGAAACACTTGGCGTATATAGCAATCTTGCTGGAACATATGATGCAATCGGCAGGCTGGATGATGCAATTCAACTTCTGGAGTACGTTGTTGGTATGAGGGAGGAAAAGCTAGGTACAGCAAACCCTGATGTGGATGATGAGAAGAGAAGGTTGAGTGAGTTGTTGAAGGAAGCTGGTAGAGTTCGGAGCCGAAAAGTGAGGTCACTTGAGAACCTCCTTGATCCAAATGCTCGGACTGTGCACAACAACAACCTTGTCATCAATGCTTGA 2229 0.445 MPGITGNGVHDDGGANDMNGNWSTSKENSTSIKSPRNSPSPPRREGDGPDHDGVVEHSIEQLYENVCDMQSSDRSPSRQSYGSDGDESRIDSELHHLVGGRMREVEIMEEEVEEEKRPGGNSSCEMSTGAGSSSNDKKLDKVDEIRPATGSSVSSEKSVKASNSQLGSETAPKSKPKGKSPAKAPAERKSDKPLRKQVKGVAAVKKSKNSPLGKSVLHSQVDNSADSGVDKLERAPILLKQARDLISSGDNPQKALQLALQALKLFEKFGDGKPSLELVMCLHVTAAIYCNLGRYDEAIPMLERSIEIPVIEEGQQHALAKFAGHMQLGDTYAMLGQLENSIMCYTTGFEIQRQVLGETDPRVGETCRYVAEANVQALQFDEAERLCQIALDIHKANSSAPSLEEAADRRLMGLICETKGNHEVALEHLVLASMAMVGNGQEEEVAAVDCSIGDTYLSLSRYDEAVFAYQKALTVFKSSKGENHPNVGSVFVRLADLYNRTGKMRDSKSYCESALRIYENPMPGVPPEEIASGLTNVSTIYESMNELEQALKLLKKALDIYDDAPGQQSTIAGIEAQMGVMYYMLGNYTESYNTLKNAISKFRALGEKKSAFFGIALNQMGLACVQRYALTEATTLFEEAKDILEHEYGPYHPETLGVYSNLAGTYDAIGRLDDAIQLLEYVVGMREEKLGTANPDVDDEKRRLSELLKEAGRVRSRKVRSLENLLDPNARTVHNNNLVINA* 743
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g0290 742 MobiDBLite consensus disorder prediction 121 135 - -
Dod09g0290 742 Pfam Tetratricopeptide repeat 445 520 - -
Dod09g0290 742 Pfam Tetratricopeptide repeat 615 682 - -
Dod09g0290 742 ProSiteProfiles TPR repeat profile. 531 564 IPR019734 GO:0005515
Dod09g0290 742 Coils Coil 697 717 - -
Dod09g0290 742 PANTHER PROTEIN KINESIN LIGHT CHAIN-RELATED 3 1 728 - -
Dod09g0290 742 Coils Coil 544 564 - -
Dod09g0290 742 PANTHER PROTEIN KINESIN LIGHT CHAIN-RELATED 3 1 728 - -
Dod09g0290 742 Pfam Tetratricopeptide repeat 534 561 IPR019734 GO:0005515
Dod09g0290 742 Gene3D Tetratricopeptide repeat domain 609 720 IPR011990 GO:0005515
Dod09g0290 742 MobiDBLite consensus disorder prediction 84 120 - -
Dod09g0290 742 Gene3D Tetratricopeptide repeat domain 238 319 IPR011990 GO:0005515
Dod09g0290 742 Gene3D Tetratricopeptide repeat domain 432 608 IPR011990 GO:0005515
Dod09g0290 742 MobiDBLite consensus disorder prediction 64 83 - -
Dod09g0290 742 Gene3D Tetratricopeptide repeat domain 323 431 IPR011990 GO:0005515
Dod09g0290 742 Pfam Tetratricopeptide repeat 286 310 IPR019734 GO:0005515
Dod09g0290 742 SMART tpr_5 531 564 IPR019734 GO:0005515
Dod09g0290 742 SMART tpr_5 656 689 IPR019734 GO:0005515
Dod09g0290 742 SMART tpr_5 364 397 IPR019734 GO:0005515
Dod09g0290 742 SMART tpr_5 446 479 IPR019734 GO:0005515
Dod09g0290 742 SMART tpr_5 488 521 IPR019734 GO:0005515
Dod09g0290 742 SMART tpr_5 614 647 IPR019734 GO:0005515
Dod09g0290 742 SMART tpr_5 572 605 IPR019734 GO:0005515
Dod09g0290 742 SMART tpr_5 322 355 IPR019734 GO:0005515
Dod09g0290 742 SMART tpr_5 279 312 IPR019734 GO:0005515
Dod09g0290 742 ProSiteProfiles TPR repeat profile. 446 479 IPR019734 GO:0005515
Dod09g0290 742 MobiDBLite consensus disorder prediction 43 58 - -
Dod09g0290 742 MobiDBLite consensus disorder prediction 17 38 - -
Dod09g0290 742 MobiDBLite consensus disorder prediction 148 171 - -
Dod09g0290 742 MobiDBLite consensus disorder prediction 180 198 - -
Dod09g0290 742 MobiDBLite consensus disorder prediction 1 221 - -
Dod09g0290 742 SUPERFAMILY TPR-like 260 691 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g0290 Dod-Chr9 4446142 4452365 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g0290 - - mtr:MTR_3g077950 1091.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g1623 05 41338223 41340756 Dod09g0290 09 4446142 4452365 PCT