Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g1623 ATGCCAGCAATTGTTGCGAATGGAGATCATAAAGGGGAAATGCATGAAGTGAAGGGGATTGGGAAGCCTTCCCACACTAGGAAAACCTCAATCTCAAGCAAGTCCCCAAGAAGTCCCTTGAGTCCACAAAGGCGCCGACGTTCTTATCCAAAATTGTCTGTTGATGGGGTGCTAGACACCTCCACTGAAAATGTCTGGGACATGCAAAGTTGTGATCACTCACCCTCAATAAGAAGCTTTGGATCTTCTGGTGATGAGCCTAGAATCGATTCGGAATCGCAGCATCTAGTTGGACTAAGGACAAGGGAAATGGAGAACACGATAGGAGGGGGTTCTGGCAGTGAAGCATCTCCTAGAATGAGTAGTCCATCCAATTTTGCTATACCAAAAAAACCAGACAAAGCATCACCACAGTCACAGTTGGGCCCTGAAACACTGCCAAAATCTACATCCAAGGGAAGAACTACTCCTTCAAAGCCTCCTGTTGATAGGAAGAACGAGAACCCTTTGAGAAAACAAACTAGCTTGAACATATCAAAGCATTCCTCTCTTGGGAGATCGAGTACGCAAAATCGAGGAGATAATCCACAGAAGGCTCTTGAATCAGCTCTTCAAGCAATGAAATTGTTTGAGGAGACTGCTAATGGGAAGCAGAGTTTAGAGCTGGTTATGTGCTTACATGTCACAGCTGCAATATATTGCTATATGGGCCAATACAATAAGGCAATTCCAATCATTGAGCACTCGGTTGAGATTCCGGTTGTCGAGGAAGGCCTACAGCATGCCCTTGCTAAATTTGCCAGTTACATGCAACTTGGAGACACCTATGCTATGTTAGGCCAACTTGAGAATTCAATCATGTGCTATACCACAGGGCTTGAACTGCAGCAGCAGGTTTTGGGGGAAACAGACCAAAGAGTTGGTGAAACTTGTAGGTATGTGGCCGAGGCCAATGTTCAAGCATTTCAATTGGACGAGGCAGAGAGGCTGTGCCAAATGGCTCTTGACATTCATAAAGCAAATAGCTTACCCTTATCTCTTGAAGAGGCAGCTGATAGGAGGCTTATGGGGCTTATATGTGAAACAAAGGGCAATCATGAAGCAGCACTGAAGCATCTTGTTTTAGCAAGCTTGGCAATGGTAGAAAATGGCCAGGAAGTGGAAGTGGCATCTGTTGATTGCAGCATTGGAGACACATTCTTGTCCTTGGCTCGATATGATGAGGCGGTTACAGCGTATCAAAAGGCACTAAAAGTTTTCAAGACCAACAAGGGAGAGAATCATCCTGCTGTGGGATCAGCTTATGTTAGGTTGGCAGAATTGTATAATAGGACATGGAAGATAAAGGAATCAAAATCATATTGTGAGAGTGCACTTAGAATCTATGAGAATCCCATGCCTGGTGTGCCTCCTGAGGACATTGCTAGTGGTCTTATCAATGTTTCAGCTATCTATGAGTCAATGAATGAGCTTGAAGAGGCAATCACGTTGCTGCACAAGGCGCTTGTGACACTCAAAGATGCCCCTGGCCAGCAAAGTACAATTGCAGGAATTCAAGCTCAGATTGGGGTCATGAACTACGTGTTGGGGAACTATAATGAATCCTACGAAGCTTTCAAGGATGCTGTATCGAAGCTTCGGGCCACCGGAGAGAAGAAATCAGCCTACTTTGGTATTGCTCTTAATCAAATGGGACTTGTCCTGTGTGCAGCTTCATGCATTGAGTGA 1728 0.4497 MPAIVANGDHKGEMHEVKGIGKPSHTRKTSISSKSPRSPLSPQRRRRSYPKLSVDGVLDTSTENVWDMQSCDHSPSIRSFGSSGDEPRIDSESQHLVGLRTREMENTIGGGSGSEASPRMSSPSNFAIPKKPDKASPQSQLGPETLPKSTSKGRTTPSKPPVDRKNENPLRKQTSLNISKHSSLGRSSTQNRGDNPQKALESALQAMKLFEETANGKQSLELVMCLHVTAAIYCYMGQYNKAIPIIEHSVEIPVVEEGLQHALAKFASYMQLGDTYAMLGQLENSIMCYTTGLELQQQVLGETDQRVGETCRYVAEANVQAFQLDEAERLCQMALDIHKANSLPLSLEEAADRRLMGLICETKGNHEAALKHLVLASLAMVENGQEVEVASVDCSIGDTFLSLARYDEAVTAYQKALKVFKTNKGENHPAVGSAYVRLAELYNRTWKIKESKSYCESALRIYENPMPGVPPEDIASGLINVSAIYESMNELEEAITLLHKALVTLKDAPGQQSTIAGIQAQIGVMNYVLGNYNESYEAFKDAVSKLRATGEKKSAYFGIALNQMGLVLCAASCIE* 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g1623 575 Pfam Tetratricopeptide repeat 268 297 IPR019734 GO:0005515
Dod05g1623 575 SUPERFAMILY TPR-like 220 371 IPR011990 GO:0005515
Dod05g1623 575 MobiDBLite consensus disorder prediction 25 39 - -
Dod05g1623 575 MobiDBLite consensus disorder prediction 9 23 - -
Dod05g1623 575 SMART tpr_5 432 465 IPR019734 GO:0005515
Dod05g1623 575 SMART tpr_5 308 341 IPR019734 GO:0005515
Dod05g1623 575 SMART tpr_5 223 256 IPR019734 GO:0005515
Dod05g1623 575 SMART tpr_5 475 508 IPR019734 GO:0005515
Dod05g1623 575 SMART tpr_5 266 299 IPR019734 GO:0005515
Dod05g1623 575 SMART tpr_5 516 549 IPR019734 GO:0005515
Dod05g1623 575 SMART tpr_5 390 423 IPR019734 GO:0005515
Dod05g1623 575 SMART tpr_5 350 383 IPR019734 GO:0005515
Dod05g1623 575 Coils Coil 488 508 - -
Dod05g1623 575 MobiDBLite consensus disorder prediction 1 197 - -
Dod05g1623 575 PANTHER PROTEIN KINESIN LIGHT CHAIN-RELATED 3 193 567 - -
Dod05g1623 575 MobiDBLite consensus disorder prediction 55 81 - -
Dod05g1623 575 Pfam Tetratricopeptide repeat 389 464 - -
Dod05g1623 575 Gene3D Tetratricopeptide repeat domain 171 378 IPR011990 GO:0005515
Dod05g1623 575 ProSiteProfiles TPR repeat profile. 390 423 IPR019734 GO:0005515
Dod05g1623 575 MobiDBLite consensus disorder prediction 171 197 - -
Dod05g1623 575 SUPERFAMILY TPR-like 325 547 IPR011990 GO:0005515
Dod05g1623 575 Gene3D Tetratricopeptide repeat domain 379 557 IPR011990 GO:0005515
Dod05g1623 575 PANTHER KINESIN LIGHT CHAIN 2 192 - -
Dod05g1623 575 MobiDBLite consensus disorder prediction 107 124 - -
Dod05g1623 575 MobiDBLite consensus disorder prediction 138 157 - -
Dod05g1623 575 PANTHER KINESIN LIGHT CHAIN 193 567 - -
Dod05g1623 575 PANTHER PROTEIN KINESIN LIGHT CHAIN-RELATED 3 2 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g1623 Dod-Chr5 41338223 41340756 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g1623 - - gmx:100791625 683.715
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g1623 05 41338223 41340756 Dod05g1623 05 41338223 41340756 ECH
Dod05g1623 05 41338223 41340756 Dod09g0290 09 4446142 4452365 PCT