Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g0272 ATGCTGAGGCTCGGCGCGAAGAGGCTTCTGGGAACGGCGTCGTTGGAGGCGGCGGTTAGGGTTCCGCCGCGGCGGCTGTACCACGAGAGGGTGGTGGACCACTACAACAACCCACGCAACGTCGGCTCCTTCGATAAGAACGACTCGGACATCGGCACCGGTCTGGTCGGAGCACCCGCATGCGGCGACGTCATGAAGCTTCAGATTAAGGTCGATGAGCAAACCGGCAAGATCGTCGACGCTCGCTTCAAAACTTTCGGTTGTGGCTCCGCCATCGCTTCTTCCTCTGTTGCTACTGAGTGGGTGAAGGGAAAGCAAATGGAGGAAGTTTTATCCATAAAAAACACTGAAATTGCAAAGCATCTTTCACTTCCACCGGTCAAGCTTCACTGCAGCATGCTTGCTGAGGATGCCATAAAAGCGGCTGTTAAAGATTATGAATCCAAGCGTGCTTCCTCAACTGCTAGTGGAGGGGCAGCAACTGGAGAGTGA 492 0.5467 MLRLGAKRLLGTASLEAAVRVPPRRLYHERVVDHYNNPRNVGSFDKNDSDIGTGLVGAPACGDVMKLQIKVDEQTGKIVDARFKTFGCGSAIASSSVATEWVKGKQMEEVLSIKNTEIAKHLSLPPVKLHCSMLAEDAIKAAVKDYESKRASSTASGGAATGE* 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g0272 163 Pfam NifU-like N terminal domain 27 151 IPR002871 GO:0005506|GO:0016226|GO:0051536
Dod09g0272 163 SUPERFAMILY SufE/NifU 26 151 - -
Dod09g0272 163 TIGRFAM iscU: FeS cluster assembly scaffold IscU 27 150 IPR011339 GO:0005506|GO:0016226|GO:0051536
Dod09g0272 163 CDD IscU_like 26 142 IPR002871 GO:0005506|GO:0016226|GO:0051536
Dod09g0272 163 PANTHER IRON-SULFUR CLUSTER ASSEMBLY ENZYME NIFU HOMOLOG 13 160 IPR002871 GO:0005506|GO:0016226|GO:0051536
Dod09g0272 163 Gene3D - 26 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g0272 Dod-Chr9 4037494 4039681 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g0272 K22068 - egr:104418091 267.314
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g1611 05 41217897 41220201 Dod09g0272 09 4037494 4039681 PCT