Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g1611 ATGCTGAGGGTGGCCGCAAAGAGGCTTATGGGAGTGCCGTCGACGGCGGCAATTAGGGTTCCGGCGCGATTGTACCACGAGAGGGTGGTGGATCACTACAACAACCCTCGCAACGTTGGGTCATTCGACAAGAACGACCCCTCCGTGGGAACTGGTCTGGTGGGTGCGCCCGCTTGCGGCGACGTGATGAAGCTGCAGATTAAGGTGGACGAGGAAACCGGCAAGATCGTCGATGCTCGATTCAAGACCTTCGGCTGTGGCTCCGCCATTGCTTCTTCATCTGTCGCTACTGAATGGGTAAAGGGAAAGCAAATGGAGGAAGTTTTATCCATTAAAAACACCGAAATTGCAAAGCATCTTTCACTTCCACCAGTTAAGCTTCACTGCAGCATGCTTGCCGAAGATGCCATTAAGGCAGCTGTGAAAGACTATGAAGCTAAGCGTGCTAAGGCTGCTGCAAGTGGAGAGGCAACAACAGGAGATGAGGTTGCGGCTGCTTGA 501 0.5329 MLRVAAKRLMGVPSTAAIRVPARLYHERVVDHYNNPRNVGSFDKNDPSVGTGLVGAPACGDVMKLQIKVDEETGKIVDARFKTFGCGSAIASSSVATEWVKGKQMEEVLSIKNTEIAKHLSLPPVKLHCSMLAEDAIKAAVKDYEAKRAKAAASGEATTGDEVAAA* 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g1611 166 PANTHER IRON-SULFUR CLUSTER ASSEMBLY ENZYME NIFU HOMOLOG 17 160 IPR002871 GO:0005506|GO:0016226|GO:0051536
Dod05g1611 166 Gene3D - 24 165 - -
Dod05g1611 166 CDD IscU_like 24 140 IPR002871 GO:0005506|GO:0016226|GO:0051536
Dod05g1611 166 SUPERFAMILY SufE/NifU 24 148 - -
Dod05g1611 166 Pfam NifU-like N terminal domain 25 150 IPR002871 GO:0005506|GO:0016226|GO:0051536
Dod05g1611 166 TIGRFAM iscU: FeS cluster assembly scaffold IscU 25 148 IPR011339 GO:0005506|GO:0016226|GO:0051536
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g1611 Dod-Chr5 41217897 41220201 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g1611 K22068 - gmx:100812566 273.092
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g1611 05 41217897 41220201 Dod09g0272 09 4037494 4039681 PCT