Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g0252 ATGAAGATGAAGGCAGCACTGAGGTACTTAGCTGGAATTGCAGGCCCTAGTGGGTTCGGCTCAAATTCAACAGCTGAACAAGTCACTGAACATTGTTCTTCCTTCCTTCCTTCTAATCTAACTGCTCTGATCACTGGGGCGACCTCTGGAATTGGAGCTGAAACAGCTAGGGTGTTAGCAAAGAGAGGAGTGAGGGTTGTGATTGCCGGGAGGGACTTGAGGAAGGGAAGGGAAGTGAGGGAGAGGATTCAAAAGGAGACTCCAAATGCTGAGGTTATTCTCTTGGAGATTGATCTTAGCTCCTTTGCTTCTGTACAGAGATTTTGTTCCGAGTTTTTAGCTTTGGACCTTCCCCTTAACATTCTCATAAACAATGCTGGGGTATTCTCCCAAAACCTAGAATTCTCTGAAGAGAAGATTGAGATGACATTTGCTACAAATTACTTAGGTCATTTTTTGCTAACCGAAATTCTATTAGACAAAATGACAGAAACCGCAGAGAAGACAGGAATTCAAGGAAGAATAATCAATGTTTCTTCTGTCATCCATAGCTGGGTGAAGAGAGATGGTTTTCGCTTCAATGACATACTCAAAGGAAGAAATTATAATGGCACACGTGCTTATGCTCAGTCAAAATTGGCCAATATTCTGCATGCCAAAGAAATAGCTAGACAGCTCAAGGCAAGGAATGCAAGAGTAGCTATCAATGCAGTGCATCCAGGCATTGTGAAGACAGGAATTATTAGAGCTCACAAGGGCTTAATAACAGATTCCCTATTTTTCATCGCATCAAAGTTGCTCAAATCGACATCACAGGGTGCATCAACTACATGTTATGTTGCTCTGAGCCCAAAAACAGAAGGGCTAAGTGGAAAGTACTTTACAGATTGCAATGAGAGTAAATGCTCGAGCCTAGCAAACGATGAATGCGAAGCTCAAAAGCTATGGAACAACACCCATGCCTTGCTACATAAGCGACTAAGTCAAGCAACAATATGA 999 0.4244 MKMKAALRYLAGIAGPSGFGSNSTAEQVTEHCSSFLPSNLTALITGATSGIGAETARVLAKRGVRVVIAGRDLRKGREVRERIQKETPNAEVILLEIDLSSFASVQRFCSEFLALDLPLNILINNAGVFSQNLEFSEEKIEMTFATNYLGHFLLTEILLDKMTETAEKTGIQGRIINVSSVIHSWVKRDGFRFNDILKGRNYNGTRAYAQSKLANILHAKEIARQLKARNARVAINAVHPGIVKTGIIRAHKGLITDSLFFIASKLLKSTSQGASTTCYVALSPKTEGLSGKYFTDCNESKCSSLANDECEAQKLWNNTHALLHKRLSQATI* 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g0252 332 PANTHER NAD(P)-BINDING ROSSMANN-FOLD PROTEIN 6 328 - -
Dod09g0252 332 Gene3D - 36 328 - -
Dod09g0252 332 PANTHER RETINOL DEHYDROGENASE 6 328 - -
Dod09g0252 332 PRINTS Glucose/ribitol dehydrogenase family signature 41 58 IPR002347 -
Dod09g0252 332 PRINTS Glucose/ribitol dehydrogenase family signature 231 248 IPR002347 -
Dod09g0252 332 PRINTS Glucose/ribitol dehydrogenase family signature 167 183 IPR002347 -
Dod09g0252 332 PRINTS Glucose/ribitol dehydrogenase family signature 117 128 IPR002347 -
Dod09g0252 332 PRINTS Glucose/ribitol dehydrogenase family signature 208 227 IPR002347 -
Dod09g0252 332 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 117 128 IPR002347 -
Dod09g0252 332 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 208 227 IPR002347 -
Dod09g0252 332 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 173 181 IPR002347 -
Dod09g0252 332 CDD retinol-DH_like_SDR_c_like 41 316 - -
Dod09g0252 332 Pfam short chain dehydrogenase 41 182 IPR002347 -
Dod09g0252 332 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 40 300 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g0252 Dod-Chr9 3759399 3764149 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g0252 21 250 Acyl Lipid Metabolism Gene Families AT1G63380 28.571 7.45e-14 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g0252 - - gmx:100801384 577.785
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g1585 05 40941872 40945930 Dod09g0252 09 3759399 3764149 PCT