Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g0247 ATGGCGAAGCTTCCCATTCCCACAGTGTTCTCTTTGAGGCACTTCTTAGTGCTGTCTCTCGCTTTGAATGTTAGCTTGATACTGAGAATGGTGTATGAAGGTGATGAGGAAATCTACGACCGCTATTGTTCCAAGGCAGAAAGAGGGACCGAGGTTGCTAGTTCTGACTCAGAGGGGCATAGCATCCACAAATCACGTTTGGTTATATCATCCACTTCATCTTTGCCCAATTCTTCTTGCACGGATCATGAAGCTGGAGGCAGCAACAGAGTCATCAATCTTGACCATGGAGATCCGACAGTGTACGAGGGATTTTGGCGACAAACGGGTGACGAGAGCACGATCACGATTCCGGGATGGCAATCGATGAGCTATTTCTCTGATGTGACCAACATTTGCTGGTTTCTGGAGCCTGAGTTTGCCAAGGAGGTTGTGAGGTTGCACACAGTGGTCGGCAATGCTGTCACACATGATCGTCACATTGTTGTCGGGACAGGCTCCTCTCAGCTCTTTCTCGCTGCACTCTATGCCCTCTCACCCACTGATGCTCCCGAACCAATCAGCGTAGTCTCTGCTTCACCCTACTACTCGTCATACCCATCAATGACGGATTACCAGAAATCAGGGCTATACAAATGGGCTGGCGATGCAGAAAGTTTTGACAAAGATGGCCCCTACATTGAGCTGGTTACTTCTCCCAATAACCCTGATGGATTTGTGAGGCGCTCTGTGGTCAACCGAAGCCAGGGACTTTTGGTTCATGACCTTGCCTATTACTGGCCCCAGTACACTCCAATTTCATCGCCTGCAGACCATGATGTAACGCTTTTCACTGTCTCTAAAAGCACTGGTCATGCAGGAATGCGCATAGGGTGGGCTCTAGTGAAAGACCGAGAGGTAGCAAAGAAAATGACCAAATTCATAGAGCTCAACACAATAGGAGTGTCCAAGGATTCACAGCTCAGGGCTGCTACGGTTTTAAGGGCAGTATCTGACAGCTGTGAACAAGGAAACACCAAAGAGAGCGAGTCATTCTTCAAGTTCAGCCACAACATCATGGCAAACAGGTGGAAGCAACTTAGAGTAGCAGTTGAGCGTAGTGGATTGTTCAGTGTGCCCAATTTTTCTCCCGCATTCTGCACCTTCTTCAATCAGGTCTTGGAGCCTCATCCAGCTTTTGTGTGGTTAAAGTGTGAGGGAAACGTAGAAGACTGCGAGAGCTTCCTTCGTGCACACAACATCCTAACAAGAAGTGGAACGCACTTTGGGGTTAGCGAGGAATATGTAAGAATTAGCATGTTGGATACGGACGAAAATTTTATGCAATTTGTAGACAGACTCTCTACCATAAAGTCGCGATAG 1362 0.478 MAKLPIPTVFSLRHFLVLSLALNVSLILRMVYEGDEEIYDRYCSKAERGTEVASSDSEGHSIHKSRLVISSTSSLPNSSCTDHEAGGSNRVINLDHGDPTVYEGFWRQTGDESTITIPGWQSMSYFSDVTNICWFLEPEFAKEVVRLHTVVGNAVTHDRHIVVGTGSSQLFLAALYALSPTDAPEPISVVSASPYYSSYPSMTDYQKSGLYKWAGDAESFDKDGPYIELVTSPNNPDGFVRRSVVNRSQGLLVHDLAYYWPQYTPISSPADHDVTLFTVSKSTGHAGMRIGWALVKDREVAKKMTKFIELNTIGVSKDSQLRAATVLRAVSDSCEQGNTKESESFFKFSHNIMANRWKQLRVAVERSGLFSVPNFSPAFCTFFNQVLEPHPAFVWLKCEGNVEDCESFLRAHNILTRSGTHFGVSEEYVRISMLDTDENFMQFVDRLSTIKSR* 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g0247 453 MobiDBLite consensus disorder prediction 70 86 - -
Dod09g0247 453 Gene3D - 43 132 IPR037029 GO:0016846
Dod09g0247 453 Gene3D Aspartate Aminotransferase, domain 1 342 451 IPR015422 GO:0003824
Dod09g0247 453 Gene3D - 137 340 IPR015421 GO:0003824
Dod09g0247 453 MobiDBLite consensus disorder prediction 70 91 - -
Dod09g0247 453 CDD AAT_like 138 447 - -
Dod09g0247 453 SUPERFAMILY PLP-dependent transferases 90 449 IPR015424 -
Dod09g0247 453 PANTHER TRYPTOPHAN AMINOTRANSFERASE-LIKE PROTEIN 1 451 - -
Dod09g0247 453 Pfam Allinase 92 450 IPR006948 GO:0016846
Dod09g0247 453 PANTHER BIFUNCTIONAL ASPARTATE AMINOTRANSFERASE AND GLUTAMATE/ASPARTATE-PREPHENATE AMINOTRANSFERASE-RELATED 1 451 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g0247 Dod-Chr9 3684823 3694332 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g0247 K16903 - gmx:100807013 707.597
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g1582 05 40856198 40864000 Dod09g0247 09 3684823 3694332 PCT