Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g1582 ATGATGGCAAATCAAACTATGTTCTCCCTGTGGCATGTCCTGGTGCTATCCCTGGCTTTGAATGTGAGTCTGATACTTAGAATGGTGTACGAATCTGAGGAAGGACACTGCTTGAAGAAAATGATGATAGCAGATTGTGGAATTAAAAGAGAGGGAGGACATGTTGTGCAGAAATCTCGTTTGGCTATAACTTCGTCCTTGGTTAATTCGACTCGTGCAGATCATCCAGGAGACAAGGGAAAAGTGATCAATCTCGACCATGGAGATCCTACGCTGTATGAAAGGTTTTGGCGACAAATGGGTGACAAGACCACGATCACAATCCCAGGGTGGCAATCCATGAGCTATTTTTCTGATGTGCCAAACATTTGCTGGTTCATGGAGCCTGAGTTTGCAGACGAGGTGGTGAGGCTGCACAAATTGGTGGGAAATGCGATCACAGAAGGTCGCCACATTGTTGTTGGGACTGGCTCCTCTCAGCTGTTTCTTGCCGCTCTTTATGCTCTGTCCCCTAAAGATGCCGATGAACCAATCAGCGTTGTCTCTGCACTACCCTATTACTCGTCATATTCATCAATGACGGATTTCCAGAAATCAGGCCTTTACAAATGGGCCGGTGATGCAGAGAGTTTTGTGAAAGATGGCCCCTACATTGAATTGGTTACTTCTCCCAATAACCCTGATGGATATACAAGGGAAGCAGTGCTTAACAGAAGCCAGGGACTATTGATTCATGACCTTGCCTATTATTGGCCGCAGTACACTCCAATCACACACCCTTCAGATCATGACCTTACGCTTTTCACTGTCTCAAAAAGCACTGGTCATGCAGGAACTCGCATTGGGTGGGCTTTAGTTAAAGACCCAGAAGTGGCCAGGAAGATGACCGAATTTGTTGAGCTCAATACGATAGGCGTCTCCAAAGATTCTCAACTAAGAGCCGCCAAGGTTTTGAAGGCAGTCTCTGATAGTTGTGAAGAAAGGAACTCCAGAGATGGGGACTCGTTCTTCAAGCACAGCTATGACGCCATGCTTCAAAGGTGGAAGCAGCTGAGAGAAGCACTTGAGGACAATGGCTTGTTTAGTTTGCCAAAATTTTCTCCTGCATTCTGCACTTTTTTCAATCAGGAGACGGAGCCTCATCCAGGTTTTTTGTGGTTGAAGTGCGAAGGAGAAATAGAAGACTGCGCAAGCCTCCTTCGACAACACAAGATCTTAGCAAGAAATGGGGAACGTTTTGGGGCTAGCGCGAAATATGTAAGAATTAGTATGCTTGATACTGAAGAAACTTTTATGGAGTTTATAGAAAGACTATCGGCCATACAGCTGTAA 1332 0.455 MMANQTMFSLWHVLVLSLALNVSLILRMVYESEEGHCLKKMMIADCGIKREGGHVVQKSRLAITSSLVNSTRADHPGDKGKVINLDHGDPTLYERFWRQMGDKTTITIPGWQSMSYFSDVPNICWFMEPEFADEVVRLHKLVGNAITEGRHIVVGTGSSQLFLAALYALSPKDADEPISVVSALPYYSSYSSMTDFQKSGLYKWAGDAESFVKDGPYIELVTSPNNPDGYTREAVLNRSQGLLIHDLAYYWPQYTPITHPSDHDLTLFTVSKSTGHAGTRIGWALVKDPEVARKMTEFVELNTIGVSKDSQLRAAKVLKAVSDSCEERNSRDGDSFFKHSYDAMLQRWKQLREALEDNGLFSLPKFSPAFCTFFNQETEPHPGFLWLKCEGEIEDCASLLRQHKILARNGERFGASAKYVRISMLDTEETFMEFIERLSAIQL* 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g1582 443 PANTHER TRYPTOPHAN AMINOTRANSFERASE-LIKE PROTEIN 4 442 - -
Dod05g1582 443 PANTHER BIFUNCTIONAL ASPARTATE AMINOTRANSFERASE AND GLUTAMATE/ASPARTATE-PREPHENATE AMINOTRANSFERASE-RELATED 4 442 - -
Dod05g1582 443 Gene3D - 128 331 IPR015421 GO:0003824
Dod05g1582 443 SUPERFAMILY PLP-dependent transferases 79 439 IPR015424 -
Dod05g1582 443 Pfam Allinase 83 441 IPR006948 GO:0016846
Dod05g1582 443 CDD AAT_like 129 438 - -
Dod05g1582 443 Coils Coil 338 358 - -
Dod05g1582 443 Gene3D - 75 123 IPR037029 GO:0016846
Dod05g1582 443 Gene3D Aspartate Aminotransferase, domain 1 334 442 IPR015422 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g1582 Dod-Chr5 40856198 40864000 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g1582 K16903 - gmx:100777098 681.789
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g1582 05 40856198 40864000 Dod05g1582 05 40856198 40864000 ECH
Dod05g1582 05 40856198 40864000 Dod09g0247 09 3684823 3694332 PCT