Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g0241 ATGGGCAAGGGGAATGCAAACACCGAGTGTGGGGGTGGTGCCTCACTACCAGCATCATCATGCGGAGACGCAAAGCAACGCAAGGTGACGTACTTCTACGAGCCAACAATAGGAGACTACTACTACGGTCAGGGCCACCCAATGAAGCCCCACAGGATCCGCATGGCCCACAGCCTCATCGTCCACTACGGCCTCCACCGCCGCATGCACGTCACCCGCCCCTTCCCTGCCTCCGCCGCCGACGTCCGCCGCTTCCACACCGACGACTACGTCGACTTCCTATCCACCGTCTCACCCGACCTCGTCGCCGCCGCCGACGCCTCCCACTCTGCCTACCGCACCCTCAGGCGCTTCAACGTCGGAGAGGACTGCCCTGTCTTCCAGGGGCTCTTCGACTTCTGCAGCGCCTCCGCCGGTGGGTCCATCGGCGCCGCCGTCGTGCTCAACCGCGGCGACTCCGACATTGCTGTTAACTGGGCTGGTGGGCTCCACCATGCCAAGAAGGCAGAGGCTTCGGGGTTCTGCTACGTCAACGACATCGTCCTCGGCATCCTCGAGCTCCTCAAGATTCATAGGCGTGTGCTGTATGTTGACATTGATGTTCACCATGGAGATGGCGTTGAGGAGGCCTTTTACACCACTGATAGAGTGATGACAGTGTCTTTTCATAAGTTTGGGGATTTTTTTCCAGGCACTGGGCACATCAAAGACATTGGGATGGGCCATGGAAAGAATTATTCTCTAAATGTCCCACTAAATGATGGAATGGATGATGAAAATTTCCGTGGTCTGTTTCGCCCCATCATTCAGAAAGTCATGGAGGTTTATCAACCTGATGCAGTTGTTCTTCAATGCGGAGCTGATTCACTAGCTGGGGACAGGTTGGGTTGCTTCAACTTGTCTGTGAAAGGTCATGCAGATTGTCTTCGTTTCCTTAGATCTTTCAATGTTCCCCTAATGATCTTGGGCGGGGGAGGATATACAATTCGGAATGTTGCTCGATGTTGGTGCTATGAGACAGCTGTGGCAGTAGGAGTGGAGCCTGATAATAAGTTGCCTTACAATGAATACTATGAGTATTTTGGCCCGGATTATACTCTTCATTACGAGACAGACAACATGGAGAACCTGAACACAGCCAAAGATATAGAAAACATTAGGAACATGCTGCTAGAACAGCTCTCTAGACTTCCCCATGCACCCGGTGCTCCTTTTCAGACAACACCATCAACAATGCAAGTTCCTGAAGAGGAAGAAGAGGATATGGAAATAAGAACAACATGTCGCCTATGGAATGGTGAAGATTTTGATTCTGATCATGATGAAGATACGAAGGCTCGTTCAAAATCTTCAAATTCAGCTGCCCATGTGAGATGCTAA 1380 0.5167 MGKGNANTECGGGASLPASSCGDAKQRKVTYFYEPTIGDYYYGQGHPMKPHRIRMAHSLIVHYGLHRRMHVTRPFPASAADVRRFHTDDYVDFLSTVSPDLVAAADASHSAYRTLRRFNVGEDCPVFQGLFDFCSASAGGSIGAAVVLNRGDSDIAVNWAGGLHHAKKAEASGFCYVNDIVLGILELLKIHRRVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHIKDIGMGHGKNYSLNVPLNDGMDDENFRGLFRPIIQKVMEVYQPDAVVLQCGADSLAGDRLGCFNLSVKGHADCLRFLRSFNVPLMILGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNEYYEYFGPDYTLHYETDNMENLNTAKDIENIRNMLLEQLSRLPHAPGAPFQTTPSTMQVPEEEEEDMEIRTTCRLWNGEDFDSDHDEDTKARSKSSNSAAHVRC* 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g0241 459 PRINTS Histone deacetylase signature 118 135 IPR003084 GO:0004407|GO:0016575
Dod09g0241 459 PRINTS Histone deacetylase signature 256 274 IPR003084 GO:0004407|GO:0016575
Dod09g0241 459 PRINTS Histone deacetylase signature 139 159 IPR003084 GO:0004407|GO:0016575
Dod09g0241 459 PRINTS Histone deacetylase signature 48 65 IPR003084 GO:0004407|GO:0016575
Dod09g0241 459 PRINTS Histone deacetylase signature 239 252 IPR003084 GO:0004407|GO:0016575
Dod09g0241 459 PRINTS Histone deacetylase signature 180 196 IPR003084 GO:0004407|GO:0016575
Dod09g0241 459 Gene3D Histone deacetylase domain 17 408 IPR037138 -
Dod09g0241 459 PRINTS Histone deacetylase superfamily signature 278 288 IPR000286 -
Dod09g0241 459 PRINTS Histone deacetylase superfamily signature 193 208 IPR000286 -
Dod09g0241 459 PRINTS Histone deacetylase superfamily signature 161 184 IPR000286 -
Dod09g0241 459 MobiDBLite consensus disorder prediction 431 449 - -
Dod09g0241 459 SUPERFAMILY Arginase/deacetylase 27 396 IPR023696 -
Dod09g0241 459 PIRSF HDAC_I_euk 13 458 IPR003084 GO:0004407|GO:0016575
Dod09g0241 459 Pfam Histone deacetylase domain 46 341 IPR023801 -
Dod09g0241 459 PANTHER HISTONE DEACETYLASE 6 12 448 - -
Dod09g0241 459 PANTHER HISTONE DEACETYLASE 12 448 - -
Dod09g0241 459 CDD HDAC_classI 32 343 - -
Dod09g0241 459 MobiDBLite consensus disorder prediction 431 459 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g0241 Dod-Chr9 3609864 3615354 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g0241 K06067 - gmx:100801159 769.615
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g1578 05 40801945 40807132 Dod09g0241 09 3609864 3615354 PCT