Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g0239 ATGAATGCTGTGGAATATGCAGAATGTGAGGCAATAGTTAAAGATTTTCCTCCGTTTATAGAGGCTATGAAGAAAAGGGGTATTGAAGACATGGAGCTTGTAATGGTTGATCCTTGGTGTACTGGATATCACAGTGAAGCGGATGCTCCCAGCAGAAGACTTGCTAAACCACTTATATTTTGTCGATCTGAAAGTGACTCCCCTATGGAAAATGGTTATGCACGCCCTGTTGAAGGCATCCATATTCTTTTTGATTTGCGGAGTATGGAGGTAATAGAGTTTGAAGACCGCAAACTTGTCCCTCTACCTCCTGTTGATCCCTTGAGGAACTATACTCCTGGTGAAACAAGAGGTGGAACTGATAGAAGTGATGTCAAACCCTTGCAAATTATTCAACCTGAAGGTCCAAGCTTTCGTGTCAATGGGCATTATGTTGAGTGGCAGAAGTGGAACTTCCGTATTGGATTCACGCCCAAAGAAGGTTTGGTTATATATTCTGTTGCATATGTTGATGGTAGTCGAGGACGAAGGCCTGTAGCTCATAGACTGAGTTTTGTGGAGATGGTTGTGCCCTATGGAGATCCAAACGATCCACATTACAGGAAGAATGCTTTTGATGCTGGTGAAGATGGCTTGGGTTTAAATGCACATTCCCTCAAGAAGAGGATCATGGAATTCTTTGGAAGCATCAAGACTGGAGAACTGGCTTGGCAGAAGTCCGAAGGTCTAGGAAGGCTCTCAGTTTCTTTTATATGCACTGTGGCAAACTATGAGTATGCATTTTTCTGGCATTTTTATCAGGCAAGTGGAGATGGAAAGATTGAAGCTGAAGTTAAGCTAACTGGAATTCTCAGCTTAGGAGCCTTGCTACCAGGAGATTATCGAAAATATGGAACCATGATTGCTCCAGGTCTATATGCTCCAGTTCATCAACATTTCTTTGTTGCTCGCATGGACATGGCTGTTGATTCTAAACCTGGTGAAGCTTTAAATCAGGTGGTGGAGGTCAACGTGAAAGTAGAGGGACCTGGTGAGAATAATGTTCACAATAATGCATTCTTTGCTGAAGAGACTTTGCTCAGATCTGAATTGGAAGCCATGCGTGATTGCAATCCTTCGAGTGCTCGACATTGGATTGTAAGGAACACTAGAACTGCCAATAGAACTGGTCAATTGACTGGCTACAAGCTAGTACCTGGCTCAAACTGCTTACCATTAGGAGGTCCTGAGGCCATGTTTTTAAGAAGAGCAGCTTTCTTGAAGCATAATCTTTGGGTAACAACACATTCTCGCGATGAGATGTATCCTGGAGGAGAATTTCCCAATCAAAATCCGCGTATTGGGGAAGGGCTAGCTACATGGGTCAAGCAGAACAGACCTTTGGAAGAAGCTGATATAGTTCTTTGGTATGTATTTGGAGTCACACATGTTCCTCGTCTTGAAGACTGGCCTGTCATGCCAGTAGAGCACATTGGTTTCACGCTCATGCCTCATGGATTTTTCAATTGTTCCCCCGCAGTAGATGTCCCTCCTAGTCCATGTGAATTGGATTCCAAAGATAATGACATCAAGGATAATGGTGCTTCCAAGCCAATTCAGAGTGGTTTAGCATCAAAACTGTAA 1623 0.4331 MNAVEYAECEAIVKDFPPFIEAMKKRGIEDMELVMVDPWCTGYHSEADAPSRRLAKPLIFCRSESDSPMENGYARPVEGIHILFDLRSMEVIEFEDRKLVPLPPVDPLRNYTPGETRGGTDRSDVKPLQIIQPEGPSFRVNGHYVEWQKWNFRIGFTPKEGLVIYSVAYVDGSRGRRPVAHRLSFVEMVVPYGDPNDPHYRKNAFDAGEDGLGLNAHSLKKRIMEFFGSIKTGELAWQKSEGLGRLSVSFICTVANYEYAFFWHFYQASGDGKIEAEVKLTGILSLGALLPGDYRKYGTMIAPGLYAPVHQHFFVARMDMAVDSKPGEALNQVVEVNVKVEGPGENNVHNNAFFAEETLLRSELEAMRDCNPSSARHWIVRNTRTANRTGQLTGYKLVPGSNCLPLGGPEAMFLRRAAFLKHNLWVTTHSRDEMYPGGEFPNQNPRIGEGLATWVKQNRPLEEADIVLWYVFGVTHVPRLEDWPVMPVEHIGFTLMPHGFFNCSPAVDVPPSPCELDSKDNDIKDNGASKPIQSGLASKL* 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g0239 540 SUPERFAMILY Amine oxidase N-terminal region 4 116 IPR016182 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Dod09g0239 540 PANTHER COPPER AMINE OXIDASE 245 536 IPR000269 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Dod09g0239 540 SUPERFAMILY Amine oxidase catalytic domain 122 511 IPR036460 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Dod09g0239 540 MobiDBLite consensus disorder prediction 515 540 - -
Dod09g0239 540 PANTHER AMINE OXIDASE 245 536 - -
Dod09g0239 540 Gene3D Copper amine oxidase, catalytic domain 236 535 IPR036460 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Dod09g0239 540 PANTHER AMINE OXIDASE 1 231 - -
Dod09g0239 540 Gene3D - 4 106 - -
Dod09g0239 540 Pfam Copper amine oxidase, enzyme domain 128 221 IPR015798 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Dod09g0239 540 Pfam Copper amine oxidase, enzyme domain 245 506 IPR015798 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Dod09g0239 540 Gene3D Copper amine oxidase, catalytic domain 118 224 IPR036460 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Dod09g0239 540 Pfam Copper amine oxidase, N3 domain 1 102 IPR015802 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Dod09g0239 540 PANTHER COPPER AMINE OXIDASE 1 231 IPR000269 GO:0005507|GO:0008131|GO:0009308|GO:0048038
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g0239 Dod-Chr9 3546389 3551794 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g0239 K00276 - gmx:100798722 956.436
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g1575 05 40725188 40728821 Dod09g0239 09 3546389 3551794 PCT