Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g0234 ATGGGCCGGGCCATCGCTGACGTCGCGCAGGCCCGATCCGTCCTCAACTTAATCGGCGAGCGGCCCACCCACGAGGAGGTGGACACCGCGCGGGCCGAGCTGGCCGACCTCGAGGCCCGCCTGTCCCGCCACCTGGAGGAGATCGTGCTGGACCCCAGGCCCGCCGACGTGGACATCCACTCGTGGCGGGCCCGGCAGGCCGAGAGGGAGCGCCGGTGCAGGGAGGACGCGGACAAGGAGAGGCGCGTTGTGAAGTCCGTGATACAGCTCGACGAGATGCACGAGGCCTACGAGAAGCTTCTCAGCGACGCAGAGAGGAGGCTCGTGAAAATTTACGAGGAAGGAGCGGAAGGAGGTTGTGGCGGTGATGAAAACAATGGTGGTGGCGATGAGATGAATGAAGAGGTTGCGGTGATACTGCAGGAAGCCTACGGGAGAGGGATGGAGAGAGTGGATCTCTCCGGGAGGACGTTGCGGTTGCTGCCGGAGGCGTTTGGGAAGATTTCTGGTTTGGTGGTGCTTGATGTTTCCAGTAATCAGCTTTCGACAATTCCTGACTCAATAGCTGGATTGCAAAATCTCGAGGAGCTTAATCTCTCTTCAAATCTTTTGGAATCACTTCCAGATTCAATTGGGTTGTTACAAAAATTGAAATTCCTCAATGTTAATGGAAACAAGCTGAGTGCCCTTCCTGATCCCATTTGTCAGTGCAGGTCATTGGTGGAGCTGGATGTAAGCTTTAACAATCTGTCATATTTGCCAACAAACATTGGATATGAACTGCCAAACTTACAGAAACTCATGATTCAATTGAACAAGATTCGATCTCTTCCCTCATCCATCTGTGAGTTGCAGTCTTTGCGCTACCTAGATGCTCACTTTAACGAGCTCCATGGGCTTCCCATCGCAATTGGGAGACTCACTAATCTTAAAGTTCTCAACCTGAGCAGCAACTTCAGTGACCTTAAAGAACTTCCAGAAACATTTGGTGATTTGACTAACCTCGAGGAATTGGATCTCAGCAATAACCAGATCCACGCGCTTCCTGATACGTTTGGTCGCCTTGATAATCTGACCAAGCTAAACTTGGAGCAGAATCCTCTCGAATTGCCACCGATGGAGATTGTAAATCAAGGGGTTGAAGCCGTAAAGAATTTTATGGCCAAGAGGTGGATTGATATATTGTTAGAGGAAGAAAGGAGAAGCAGTCAAGAAATGCAAGAACAAGGACAGGGCGGCTGGTTAACAAGAAGCACCTCCTGGTTGAAGAGTGTTTCTGGAAATGTAATTGGTTATCTTGGAACCGTTGGATCTCCTAATACACCCAAATCTCCCAGAGATGCTTATCTTGATCAGCAGCTATGA 1365 0.5048 MGRAIADVAQARSVLNLIGERPTHEEVDTARAELADLEARLSRHLEEIVLDPRPADVDIHSWRARQAERERRCREDADKERRVVKSVIQLDEMHEAYEKLLSDAERRLVKIYEEGAEGGCGGDENNGGGDEMNEEVAVILQEAYGRGMERVDLSGRTLRLLPEAFGKISGLVVLDVSSNQLSTIPDSIAGLQNLEELNLSSNLLESLPDSIGLLQKLKFLNVNGNKLSALPDPICQCRSLVELDVSFNNLSYLPTNIGYELPNLQKLMIQLNKIRSLPSSICELQSLRYLDAHFNELHGLPIAIGRLTNLKVLNLSSNFSDLKELPETFGDLTNLEELDLSNNQIHALPDTFGRLDNLTKLNLEQNPLELPPMEIVNQGVEAVKNFMAKRWIDILLEEERRSSQEMQEQGQGGWLTRSTSWLKSVSGNVIGYLGTVGSPNTPKSPRDAYLDQQL* 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g0234 454 MobiDBLite consensus disorder prediction 435 454 - -
Dod09g0234 454 SUPERFAMILY L domain-like 148 373 - -
Dod09g0234 454 SMART LRR_bac_2 332 351 - -
Dod09g0234 454 SMART LRR_bac_2 168 187 - -
Dod09g0234 454 SMART LRR_bac_2 191 210 - -
Dod09g0234 454 SMART LRR_bac_2 214 233 - -
Dod09g0234 454 SMART LRR_bac_2 261 280 - -
Dod09g0234 454 SMART LRR_bac_2 307 328 - -
Dod09g0234 454 SMART LRR_bac_2 237 256 - -
Dod09g0234 454 SMART LRR_bac_2 284 303 - -
Dod09g0234 454 ProSiteProfiles Leucine-rich repeat profile. 193 214 IPR001611 GO:0005515
Dod09g0234 454 SMART LRR_typ_2 191 213 IPR003591 -
Dod09g0234 454 SMART LRR_typ_2 307 331 IPR003591 -
Dod09g0234 454 SMART LRR_typ_2 168 190 IPR003591 -
Dod09g0234 454 SMART LRR_typ_2 261 284 IPR003591 -
Dod09g0234 454 SMART LRR_typ_2 214 237 IPR003591 -
Dod09g0234 454 SMART LRR_typ_2 332 355 IPR003591 -
Dod09g0234 454 SMART LRR_typ_2 238 260 IPR003591 -
Dod09g0234 454 PRINTS Leucine-rich repeat signature 171 184 - -
Dod09g0234 454 PRINTS Leucine-rich repeat signature 332 345 - -
Dod09g0234 454 Coils Coil 87 114 - -
Dod09g0234 454 Pfam Leucine rich repeat 170 227 IPR001611 GO:0005515
Dod09g0234 454 Pfam Leucine rich repeat 238 297 IPR001611 GO:0005515
Dod09g0234 454 Pfam Leucine rich repeat 308 368 IPR001611 GO:0005515
Dod09g0234 454 Coils Coil 27 47 - -
Dod09g0234 454 Gene3D Ribonuclease Inhibitor 120 291 IPR032675 -
Dod09g0234 454 PANTHER PLANT INTRACELLULAR RAS-GROUP-RELATED LRR PROTEIN 1 1 440 - -
Dod09g0234 454 Gene3D Ribonuclease Inhibitor 295 388 IPR032675 -
Dod09g0234 454 PANTHER LEUCINE-RICH REPEAT-CONTAINING 1 440 - -
Dod09g0234 454 ProSiteProfiles Leucine-rich repeat profile. 334 355 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g0234 Dod-Chr9 3474753 3478997 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g0234 161 376 Receptor kinase-like Gene Family AT3G51740 32.287 3.67e-16 79.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g0234 - - gmx:100803823 664.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g1567 05 40637976 40641492 Dod09g0234 09 3474753 3478997 PCT