Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g1567 ATGGATCCCAACCCAGGAACCTTCCCCATCCTCTCCTACGTCATGTCCCGCTTACCTTCCTTCGGCGCCAGAGCCGCCACCAACAACAACACCACCAACGAAACCACCACCCCTTCCCATTCCCAATTCGGCGTCGAACAACCGAACCCTTCCTCCTCCTCCTCCTCCTCCCACCACCACTCCGAGATCGTAGGGCAGATGCCCCAGCTGGCGGACCCCGCCCTCCTGGCGTCCATGACACGCGCCATCTCGGACGTGTCCCAGGCCCGATCCGTCCTCAAGCTGATCGGCGACCGCCCCACCCACGAGGAAATCGACAACGCCAAGGCCAAGCTGGCAGACATCGACGCCCTCCTCTCCCGCCAGCTGCAGGAGATCGCGGCTCTCCCCATGCCCCCCGAGTCCTCCCCAGACACGTGGCGCGACCACGTCGCTCTGAGGGAGAAGGGCTGCAGGGACTCCGCTGAGCGCGAGAAGCGCCTGTACAACTCGCTCATACAGCTCGACGAGATGCACGATGCCTACGAGAAGCTACTCAGGGATGCGGAGAATAGGCTCGTGAAGATTTACGAGCAGAGAAAGGAGGAAGATGATGATGGTGATGGTGCTGAGGTGAATGACGAAGAGGTTAAGGGGATACTGGAGGAGGCTGATGTGAAAGGGGTGGAGCGAGTGGACCTTTCCGGGCAGCACCTGAGGCTCCTGCCTGAGGCCTTTGGCCGCATTCAGAGCTTGGTTGTGCTCCTTGTTTCCGGCAACCAGCTTTCGGTGATTCCTGACTCAATAGCTGGATTGCAAAATCTTGAGGAGCTTAATATGTCGTCAAATGTTTTGGAGTCACTGCCAGATTCAATTGGCTTGCTACAAAAGCTGAAATTCCTCAATGTATCTGGAAACAAGCTGACTGCCCTTCCTGATTCCATCAGTCAGTGCAGGTCATTGGTGGAGCTAGATGTGAGCTTCAACAGTCTCTCATATTTGCCAACAAACATTGGATACGAATTACAGAACTTAGAGAAGCTCTATATTCAGTTGAACAAGATTCGATCTCTCCCCTCATCGGTTTGTGAGATGAAGTCCTTGGGCTATCTGGATGCTCACTTCAATGAGCTACACGGGCTTCCAATGGCAATTGGGAAATTGACCAATCTTGAGGTTCTCAACCTGAGCAGTAACTTCAGCGACCTTAATGAACTCCCAGAGACATTTGGTGATCTGATTAGCCTCAAAGAACTGGACCTCAGCAACAATCAGATTCATGCACTTCCTGACACATTTGGTCGCCTTGATTATCTGACCAAGCTAAACTTGGAGCAGAACCCTCTTGAAGTGCCTCCAATGGAGATTGTAGATCAAGGGGTCCAAGCCGTAAAGGATTTCATGGTCCAGAGGTGGATTGATATGTTGGCTGAGGCAGAAAGGAAGAGCAAGGAGGAGTCACAAGAACAAGGACAGAATGGATGGTTAACAAGAAGCACTTCCTGGTTGAAGAATGTTTCTGGAAATGTAACTGACTATATTGGAACTGCCGTTATGTCCCCAAAATCTCCCAAAGAGGCTTATCTCGATCAACAGCTATAA 1581 0.5225 MDPNPGTFPILSYVMSRLPSFGARAATNNNTTNETTTPSHSQFGVEQPNPSSSSSSSHHHSEIVGQMPQLADPALLASMTRAISDVSQARSVLKLIGDRPTHEEIDNAKAKLADIDALLSRQLQEIAALPMPPESSPDTWRDHVALREKGCRDSAEREKRLYNSLIQLDEMHDAYEKLLRDAENRLVKIYEQRKEEDDDGDGAEVNDEEVKGILEEADVKGVERVDLSGQHLRLLPEAFGRIQSLVVLLVSGNQLSVIPDSIAGLQNLEELNMSSNVLESLPDSIGLLQKLKFLNVSGNKLTALPDSISQCRSLVELDVSFNSLSYLPTNIGYELQNLEKLYIQLNKIRSLPSSVCEMKSLGYLDAHFNELHGLPMAIGKLTNLEVLNLSSNFSDLNELPETFGDLISLKELDLSNNQIHALPDTFGRLDYLTKLNLEQNPLEVPPMEIVDQGVQAVKDFMVQRWIDMLAEAERKSKEESQEQGQNGWLTRSTSWLKNVSGNVTDYIGTAVMSPKSPKEAYLDQQL* 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g1567 526 SUPERFAMILY L domain-like 219 442 - -
Dod05g1567 526 PANTHER LEUCINE-RICH REPEAT-CONTAINING 4 511 - -
Dod05g1567 526 ProSiteProfiles Leucine-rich repeat profile. 408 429 IPR001611 GO:0005515
Dod05g1567 526 Coils Coil 462 482 - -
Dod05g1567 526 MobiDBLite consensus disorder prediction 24 63 - -
Dod05g1567 526 Coils Coil 165 199 - -
Dod05g1567 526 PANTHER PLANT INTRACELLULAR RAS-GROUP-RELATED LRR PROTEIN 1 4 511 - -
Dod05g1567 526 SMART LRR_typ_2 288 311 IPR003591 -
Dod05g1567 526 SMART LRR_typ_2 265 287 IPR003591 -
Dod05g1567 526 SMART LRR_typ_2 381 405 IPR003591 -
Dod05g1567 526 SMART LRR_typ_2 312 334 IPR003591 -
Dod05g1567 526 SMART LRR_typ_2 242 264 IPR003591 -
Dod05g1567 526 SMART LRR_typ_2 406 429 IPR003591 -
Dod05g1567 526 SMART LRR_typ_2 335 358 IPR003591 -
Dod05g1567 526 Gene3D Ribonuclease Inhibitor 151 327 IPR032675 -
Dod05g1567 526 ProSiteProfiles Leucine-rich repeat profile. 337 358 IPR001611 GO:0005515
Dod05g1567 526 ProSiteProfiles Leucine-rich repeat profile. 290 311 IPR001611 GO:0005515
Dod05g1567 526 SMART LRR_bac_2 265 284 - -
Dod05g1567 526 SMART LRR_bac_2 242 261 - -
Dod05g1567 526 SMART LRR_bac_2 335 354 - -
Dod05g1567 526 SMART LRR_bac_2 406 425 - -
Dod05g1567 526 SMART LRR_bac_2 381 402 - -
Dod05g1567 526 SMART LRR_bac_2 288 307 - -
Dod05g1567 526 SMART LRR_bac_2 311 330 - -
Dod05g1567 526 Pfam Leucine rich repeat 244 301 IPR001611 GO:0005515
Dod05g1567 526 Pfam Leucine rich repeat 312 371 IPR001611 GO:0005515
Dod05g1567 526 Pfam Leucine rich repeat 383 442 IPR001611 GO:0005515
Dod05g1567 526 ProSiteProfiles Leucine-rich repeat profile. 267 288 IPR001611 GO:0005515
Dod05g1567 526 Gene3D Ribonuclease Inhibitor 332 493 IPR032675 -
Dod05g1567 526 Coils Coil 105 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g1567 Dod-Chr5 40637976 40641492 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g1567 235 445 Receptor kinase-like Gene Family AT4G26540 32.787 5.86e-19 89.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g1567 - - gmx:100782818 720.694
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g1567 05 40637976 40641492 Dod09g0234 09 3474753 3478997 PCT