Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g0148 ATGGCTACAACAGTGGGAGAGAGTCCTAGGAGCCCAGAGGCAAAGCTTGGGATGAGAGTGGAGGATCTTTGGGATATTCAGGAGCCACAGCTAAGTCCTAATGACAAGCTTAATGCTTGTTTTGAAAGCATCCCTGTCTCTGCCTTCCCTCCGGCTCCTTCAAACCAAGATGTCGAGATAAAATCAGACACTAGCTTAGCCGAGGCTGTTGAAACATTGGCACAGCATAACATTCTCAGTGCACCTGTGGTGGATGTTGATGCACCTGAAGATGCTAGTTGGATTGACAGATACCTAGGAATAGTTGAGTTTGCTGGAATTGCTGTGTGGATTCTGCATCAGTCTGATCCTACATCTCCTAAGAGTCCGTCCAGTGCAACTGCTATTAAAACTGCAGCAAATGGTACGGCGTCTGATCTAAAATTTGAGGTCCAAAGCCTTGGATCTGCTGCAACAACTTCAGGGAACTTTTTTGAGGATCTGACTTCCTCTGAGCTCTACAAGAATACCAAGGTTGTTGGTGATATTTCAGGGTCATTCCGGTGGGCCCCATTTCTGGCTTTGGAGAGTTCAAACTCATTTTTGACCATGCTCTTGCTGCTTTCTAAGTACAAGATGAAGAGTGTTCCTGTGGTAGACTTAGGTTCAGGTAAAATTGATAACATTATTACACAGTCTTCTGTGATTCACATGTTGGCAGAATGTGCTGGTCTTCACTGGTTTGAGAATTGGGGAACCAAGAAACTATCAGAAGTCGGTCTTCCCCTTGTGACACCAAATCATATCATCAAGGTTTATGAGGATGAGCCAGTGCTTCAAGCATTTAAACTGATGAGGAAAGAGAGGATCGGAGGTGTGCCTGTAATCGAAAGGGGTGGTAGCAAGGCAGTGGGTAATATAAGCCTGCAAGATGTTCAATTCTTGCTAACGGCTCCAGAAATCTACCATGATTACAGAGCTATTACAGTCAAACACTTCTTAACAGCCGTTAGAAGCTACTTGGAGAAGCATGAAGGGGCCTTCCCAATGTCAAGGGGTTTGATTACATGCAAAAAAGATTGCACAATCAAGGAATTGATTCAATTGCTTGACCATGAGAAGATTCATAGGGTCTATGTTGTGGATGATGATGGGAATCTTGAAGGACTGATCACACTCAGAGATATCATCTCAAGGCTAGTACATGAGCCCCGTGGCTATTTTGGTGATTTCTTTGATGGTGTTCTCCCAATGCCTCCAAACAGCAGGGTTTAA 1254 0.4434 MATTVGESPRSPEAKLGMRVEDLWDIQEPQLSPNDKLNACFESIPVSAFPPAPSNQDVEIKSDTSLAEAVETLAQHNILSAPVVDVDAPEDASWIDRYLGIVEFAGIAVWILHQSDPTSPKSPSSATAIKTAANGTASDLKFEVQSLGSAATTSGNFFEDLTSSELYKNTKVVGDISGSFRWAPFLALESSNSFLTMLLLLSKYKMKSVPVVDLGSGKIDNIITQSSVIHMLAECAGLHWFENWGTKKLSEVGLPLVTPNHIIKVYEDEPVLQAFKLMRKERIGGVPVIERGGSKAVGNISLQDVQFLLTAPEIYHDYRAITVKHFLTAVRSYLEKHEGAFPMSRGLITCKKDCTIKELIQLLDHEKIHRVYVVDDDGNLEGLITLRDIISRLVHEPRGYFGDFFDGVLPMPPNSRV* 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g0148 417 Pfam CBS domain 262 305 IPR000644 -
Dod09g0148 417 Pfam CBS domain 341 394 IPR000644 -
Dod09g0148 417 PANTHER BNAA06G16460D PROTEIN 8 417 - -
Dod09g0148 417 SUPERFAMILY CBS-domain pair 243 403 IPR046342 -
Dod09g0148 417 ProSiteProfiles CBS domain profile. 257 318 IPR000644 -
Dod09g0148 417 Gene3D - 245 396 IPR046342 -
Dod09g0148 417 ProSiteProfiles CBS domain profile. 53 118 IPR000644 -
Dod09g0148 417 Gene3D - 36 239 IPR046342 -
Dod09g0148 417 ProSiteProfiles CBS domain profile. 343 401 IPR000644 -
Dod09g0148 417 CDD CBS_pair_SF 198 305 - -
Dod09g0148 417 SUPERFAMILY CBS-domain pair 30 233 IPR046342 -
Dod09g0148 417 CDD CBS_pair_SF 261 390 - -
Dod09g0148 417 SMART cbs_1 261 310 IPR000644 -
Dod09g0148 417 SMART cbs_1 184 233 IPR000644 -
Dod09g0148 417 SMART cbs_1 346 394 IPR000644 -
Dod09g0148 417 SMART cbs_1 56 112 IPR000644 -
Dod09g0148 417 PANTHER AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT 8 417 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g0148 Dod-Chr9 2150904 2154018 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g0148 - - gmx:100780629 687.952
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g1498 05 39871620 39875685 Dod09g0148 09 2150904 2154018 PCT