Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g1498 ATGATGGCAATGGCAATGGCAACAATGGGAGAGATTCCAAGAAGCCCAGAAGCGAAGCTGGGGATGAGAGTGGAGCATCTTTGGGACGTTCAGGAGCCACAACTAAGTCCTACTGAGAAGCTTAATGCATGTTTTGAAAGCATCCCTGTGTCTGCTTTTCCTTTGGCTCCTTCAAACAAAGAAATTGAGATAAAATCAGATGCCACCCTGGCCGAAGCTGTTAAAATGCTGGCAGGTCATAACATCCTCAGCGCACCTGTGGTGGATGTTGACGCACCCGAAGATGCTAGTTGGATTGACAGATACATAGGAATAATTGAGTTTGCCGGAATTGTTGTGTGGATTCTACATCAGTCTGAACCTTCATCTCCTAGGAGTCCATCGACTCCATCCAGTGCAAGTGCTATTGCAGCTAAAGCTAACGGATTGACTTTTGCTCTAGAACTTGAAGCCTTGGGCCTTGGATCAGCTGCAACAACTGCAGGGAACTTTTTCGAGGATCTCACTTCTTCTGAACTATACAAGAATACCAAGGTTCGTGATATGTCAGGCACATTCCGGTGGGCCCCATTTCTTGCTTTGGAGAGATCGAACTCATTTCTAACCATGCTCTTGCTGCTTTCAAATTACAAGATGAAGAGTGTTCCTGTGGTAGATTTAGGGGCTGATAGAATTGATAACATTATTACACAGTCTGCTGTGATTCACATGTTGGCAGAATGTGCTGGGCTTCAGTGGTTTGAGAGTTGGGGAACTAAGAATCTACCTGAAGTTGGTCTTCCCCTGGTGACACAAGATGACATCGTTAAGGTTTATGAGGATGAACCAGTACTTCAAGCATTTAAACTAATGAGGAAGAAGAGGATTGGTGGGGTGCCTGTAATAGAAAGGGGTGGGGGCAAGGCAGTTGGTAATATAAGCCTGAGAGATGTTCAGTTCTTGCTAACTGCCCCAGAAATCTACCATGATTACAGAGCTATTACAGTTAAGGACTTCCTCACAGCCGTTAGAAGCTACCTAGAGATGAACAAAAACGCCACCCCAATGTCAAGTGAATTCATTACATGCAAAAAGGATTGCTCAATCAAAGACCTTATTCAGTTGCTTGACCATGAGAAGATTCATAGGGTCTATGTTGTGGATTATGATGGGAATCTGGAAGGACTTATCACACTAAGAGATATCATCTCAAGGCTAGTACATGAGCCCCGTGGCTATTTTGGTGATTTCTTTGATGGTGTTCTCCCGCTGCCTCTAGACAGCAGGGTTTAA 1272 0.445 MMAMAMATMGEIPRSPEAKLGMRVEHLWDVQEPQLSPTEKLNACFESIPVSAFPLAPSNKEIEIKSDATLAEAVKMLAGHNILSAPVVDVDAPEDASWIDRYIGIIEFAGIVVWILHQSEPSSPRSPSTPSSASAIAAKANGLTFALELEALGLGSAATTAGNFFEDLTSSELYKNTKVRDMSGTFRWAPFLALERSNSFLTMLLLLSNYKMKSVPVVDLGADRIDNIITQSAVIHMLAECAGLQWFESWGTKNLPEVGLPLVTQDDIVKVYEDEPVLQAFKLMRKKRIGGVPVIERGGGKAVGNISLRDVQFLLTAPEIYHDYRAITVKDFLTAVRSYLEMNKNATPMSSEFITCKKDCSIKDLIQLLDHEKIHRVYVVDYDGNLEGLITLRDIISRLVHEPRGYFGDFFDGVLPLPLDSRV* 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g1498 423 PANTHER SNF1-RELATED PROTEIN KINASE REGULATORY SUBUNIT GAMMA 1-RELATED 6 423 - -
Dod05g1498 423 ProSiteProfiles CBS domain profile. 263 324 IPR000644 -
Dod05g1498 423 CDD CBS_pair_SF 266 396 - -
Dod05g1498 423 ProSiteProfiles CBS domain profile. 349 407 IPR000644 -
Dod05g1498 423 PANTHER AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT 6 423 - -
Dod05g1498 423 Gene3D - 252 402 IPR046342 -
Dod05g1498 423 ProSiteProfiles CBS domain profile. 57 122 IPR000644 -
Dod05g1498 423 SUPERFAMILY CBS-domain pair 33 239 IPR046342 -
Dod05g1498 423 Pfam CBS domain 266 311 IPR000644 -
Dod05g1498 423 Pfam CBS domain 349 400 IPR000644 -
Dod05g1498 423 SMART cbs_1 267 316 IPR000644 -
Dod05g1498 423 SMART cbs_1 60 116 IPR000644 -
Dod05g1498 423 SMART cbs_1 352 400 IPR000644 -
Dod05g1498 423 SMART cbs_1 190 239 IPR000644 -
Dod05g1498 423 Gene3D - 42 243 IPR046342 -
Dod05g1498 423 SUPERFAMILY CBS-domain pair 266 409 IPR046342 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g1498 Dod-Chr5 39871620 39875685 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g1498 - - gmx:100818156 694.501
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g1498 05 39871620 39875685 Dod05g1498 05 39871620 39875685 ECH
Dod05g1498 05 39871620 39875685 Dod09g0148 09 2150904 2154018 PCT