Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g0129 ATGGCGAGTCAAAGTGGTTCCTCTCGAAGGAGTATTTCGTCTACGAGGAAATCCTCCGAGTCTGCTGCTCCTCAATCTAATGCTCGAAAATCTTTTTCGTCTTCGCGTCCCATGGGATTAACGGGAGAGCGGACGGTGAAATCATTGCGCCTTTCAAAGGCCCTGACAGTACCTGAAACAACAACGATCTATGATGCTTGCCGTCGTATGGCTGCCCGCAGAGTAGATGCTTTATTACTAACAGATCCTAATGCTTTGCTCTCTGGAATCCTCACGGACAAGGACATAGCAACAAGAGTTATTGCCCGTGAGGTTAGTCTTGAAGACACACCTGTGTCCAAGGTCATGACTAGGAATCCAGTATTTGTCCTTTCTGAAACTCTTGCGGTGGAAGCCCTCCAAAAGATGGTGCAAGGGAAATTCAGGCATTTACCTGTGGTGGATAATGGAGAAGTTGTTGCCTTACTTGACATAGCAAAGTGTTTGTATGATGCCATTGCCCGTATGGAAAGGGCAGCTGAGAAAGGAAAAGCAATTGCAGCAGCTGTTGAGGGTGTTGAAAAAAATTGGGGAACAACTGCTTCTGTCAATTCATCGTTCATTGAGACCCTGCGGGAGCAGATATTCAAGCCATTGTTGTCTACAATCATTTCTGAGAATTCAAAGGTTGTAACCGTTTTGCCAACGGACTCTGTTTTGACAACTACAAAGAAGATGCTTGAACTTCATGCAAATTCTGCTGTTGTGACAGTTGATGACAAACCTCGTGGTATCCTTACTTCAAAGGATATCTTGATGCGGGTCATTGCACAAAATCTTCCTCCAGAGTCCACTCCTGTTGAGAAGGTCATGACTCCAAGTCCAGAATGTGCAGTTATTGATACACCAATTGTTGATGCACTTCACACTATGCATGATGGGAAATTTTTGCATCTTCCTGTAGTTGATAGAGATGGCAGTGTAGTTGCTGTGGTTGATGTGATTCATCTCACTCATGCTGCTGTGGCGACAATAAGTCAGGTTGGAAACAATGAAGCAGCCAGCTCCATGATGCAAAGATTTTGGGATTCAGCCATGGACTTAACCCCAGATGATGATGATGATGAAACACGAAGTGACAATTCCTTGAAATCCTTGAAATTGGCTTCTGAGGGAGGAGCAACAGGGAGATCCCTCACTTATCTTGCATCAAGCATGCCAAATACATTTTCCTTCAAAATACAAGATAGGAAGGGCAGAATGCATAGATTCACATGTGATACTCGGAGCATGACAGAGGTTATAACTTCAATCCTTCAGAGACTTGGTGATGATATTGACCCCAATAACCTACCCCAAATTCTGTATGAAGATGAAGACCATGATAAAGTTGTATTGGCTTCAGACAGTGATCTTGCTGCAGCTGTGGACCACGCAAGGACAGCTGGTTTGAAGGGATTAAAATTGCATTTAGACTACGCTGGAACACGTGGTTCTCGGAAAGGTTCTAGTTCAGGAAGTTTGGAGCATGCTACTTCAGATGCATGGGCCTCGGCATATAGTGCTGTTGCTGCTGGAGCTGCACTTGTTGCTGGTTTAAGCATATTAACGTTCTTGAAGAGAAGTTGA 1608 0.4434 MASQSGSSRRSISSTRKSSESAAPQSNARKSFSSSRPMGLTGERTVKSLRLSKALTVPETTTIYDACRRMAARRVDALLLTDPNALLSGILTDKDIATRVIAREVSLEDTPVSKVMTRNPVFVLSETLAVEALQKMVQGKFRHLPVVDNGEVVALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKNWGTTASVNSSFIETLREQIFKPLLSTIISENSKVVTVLPTDSVLTTTKKMLELHANSAVVTVDDKPRGILTSKDILMRVIAQNLPPESTPVEKVMTPSPECAVIDTPIVDALHTMHDGKFLHLPVVDRDGSVVAVVDVIHLTHAAVATISQVGNNEAASSMMQRFWDSAMDLTPDDDDDETRSDNSLKSLKLASEGGATGRSLTYLASSMPNTFSFKIQDRKGRMHRFTCDTRSMTEVITSILQRLGDDIDPNNLPQILYEDEDHDKVVLASDSDLAAAVDHARTAGLKGLKLHLDYAGTRGSRKGSSSGSLEHATSDAWASAYSAVAAGAALVAGLSILTFLKRS* 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g0129 535 MobiDBLite consensus disorder prediction 1 40 - -
Dod09g0129 535 CDD CBS_pair_MUG70_1 51 167 - -
Dod09g0129 535 ProSiteProfiles CBS domain profile. 284 341 IPR000644 -
Dod09g0129 535 ProSiteProfiles CBS domain profile. 50 107 IPR000644 -
Dod09g0129 535 Gene3D - 209 338 IPR046342 -
Dod09g0129 535 PANTHER CBS/OCTICOSAPEPTIDE/PHOX/BEMP1 (PB1) DOMAIN PROTEIN 20 523 - -
Dod09g0129 535 CDD PB1_MUG70 403 487 - -
Dod09g0129 535 CDD CBS_pair_MUG70_2 220 336 - -
Dod09g0129 535 Pfam PB1 domain 402 485 IPR000270 GO:0005515
Dod09g0129 535 SUPERFAMILY CBS-domain pair 221 335 IPR046342 -
Dod09g0129 535 ProSiteProfiles PB1 domain profile. 400 487 IPR000270 GO:0005515
Dod09g0129 535 ProSiteProfiles CBS domain profile. 116 174 IPR000644 -
Dod09g0129 535 ProSiteProfiles CBS domain profile. 217 276 IPR000644 -
Dod09g0129 535 SUPERFAMILY CBS-domain pair 43 160 IPR046342 -
Dod09g0129 535 SUPERFAMILY CAD & PB1 domains 396 487 - -
Dod09g0129 535 SMART cbs_1 222 269 IPR000644 -
Dod09g0129 535 SMART cbs_1 119 163 IPR000644 -
Dod09g0129 535 SMART cbs_1 53 101 IPR000644 -
Dod09g0129 535 SMART cbs_1 287 335 IPR000644 -
Dod09g0129 535 MobiDBLite consensus disorder prediction 359 379 - -
Dod09g0129 535 Pfam CBS domain 112 156 IPR000644 -
Dod09g0129 535 Pfam CBS domain 52 98 IPR000644 -
Dod09g0129 535 Pfam CBS domain 280 332 IPR000644 -
Dod09g0129 535 Pfam CBS domain 220 266 IPR000644 -
Dod09g0129 535 Gene3D - 25 181 IPR046342 -
Dod09g0129 535 PANTHER AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT 20 523 - -
Dod09g0129 535 SMART PB1_new 402 487 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g0129 Dod-Chr9 2015500 2023629 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g0129 - - gmx:100785816 759.599
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod09g0129 09 2015500 2023629 Dod04g2683 04 50816171 50821335 PCT