Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g2683 ATGGCAAGTCCAGGAGGTCGAAGGAGTGTGTCGTTGTTGAATAGCCCTTCGCGCGCTAAGAAGAAAACCTCTGAGCCTCCATCCCCCAATACTAGGAAATCATTTCCCGCTCAGCGCGCGGGAGAGCGAACTGTGAAATCATTGCGACTTTCAAAGGCCTTGACAGTGCCTGAAACAACAACTGTTTATGAAGCTTGCCGTCGCATGGCTGCCCGTAAAGTTGATGCTCTTTTGCTAACCGATTGTAATGCTTTGCTCTCTGGAATTCTCACGGACAAGGATATAGCAACAAGAGTCGTTGCTCGAGAGCTTAATCTGGAAGAGACACATGTTTCCAAAGTTATGACAAGGAATCCAGTATTTGTCCTTTCTGACACACTTGCTGTGGAAGCCCTCCAAAAGATGGTTCAAGGCAAATTCAGACATCTACCTGTGGTAGAGAATGGAGAAGTTATTGCCATACTTGACATAGCAAAGTGTTTGTACGACGCCATTGCCCGTCTAGAAAGGGCAGCTGAGAAAGGAAAAGCAATTGCAGCGGCTGTTGAAGGTATCGAAAAACACATGGGAACATCTGCTCCTGGCTCCAATTCATCATTCATTGAGACTCTTAGGGAGCAAATATTCAAGCCATCATTGTCTACAATCATTCCTGAGAATTCAAAGGTTGTAACAGTTTCACCAACAGACACAGTTTTGGCAACAACAAAGAAGATGGTTGAACTTCGTGTAAGTTCTGCTATTGTGACGGTTGAAGACAAACCTTGTGGTATCGTCACTTCAAAGGATATCTTAATGCGGGTAATAGCACAAAATCTTCCTCCATCATCAACTCCTGTTGAGAAGGTCATGACTCCAAGTCCAGAATGTGCAGTGAATGATACACCAATTGTTGATGCGCTTCACACCATGCATGATGGAAAATTTCTGCATCTTCCTGTGCTTGATAAAGATGGCACTGTTGTTGCTATTGCTGATGTGATTCATATCACTCATGCTGCTGTGGCGACAGCTAGTCAGGTTGGAAATACTGCCAATTTGAACAATGAAGCTGCTAACTCCATGATGCAGAAGTTTTGGGATTCGGCCATGGCTTTAACTCTGAACGATGATGAGGAGGATTCACAAAGTGACAGTTCATTGAAAATGGTTTCTGAGGGTGGAGAAACAGGGAGATCCGTTTCTTTCAATACGTCAAGCATGTTGAATGCATTTTCCTTCAAAATACAAGATAAGAAGGGCAGACTGCATAGATTCACTTGTGAAACTCGGAGCTTGACAGAGGTTATAACTTCTATCATTCAGAGAGTTGGTAATGATATTGACCCTAATAACCTGCCCCAGATTCTGTACGAAGACGAAGAGCATGACAAAGTTCTATTGGCTTCAGACAGTGATCTTGCTGCAGCTGTGGACCACGCTAAGGCAGCTGGTTTGAAGGGATTGAGATTGCATTTAGACTTCTCAGGAGTACATGGTTATGGAAGAGATCCTAGTTTGGAAAGTCTGGAATATACAAGTTTAGCATGGGCCTCGGCATACAGTGCCGTTGCAGCTGGAGCAGCAATTATTGCTGGTTTAGGCCTATTAGCGTTCTTGAAGCGAAGTCGATGA 1614 0.4411 MASPGGRRSVSLLNSPSRAKKKTSEPPSPNTRKSFPAQRAGERTVKSLRLSKALTVPETTTVYEACRRMAARKVDALLLTDCNALLSGILTDKDIATRVVARELNLEETHVSKVMTRNPVFVLSDTLAVEALQKMVQGKFRHLPVVENGEVIAILDIAKCLYDAIARLERAAEKGKAIAAAVEGIEKHMGTSAPGSNSSFIETLREQIFKPSLSTIIPENSKVVTVSPTDTVLATTKKMVELRVSSAIVTVEDKPCGIVTSKDILMRVIAQNLPPSSTPVEKVMTPSPECAVNDTPIVDALHTMHDGKFLHLPVLDKDGTVVAIADVIHITHAAVATASQVGNTANLNNEAANSMMQKFWDSAMALTLNDDEEDSQSDSSLKMVSEGGETGRSVSFNTSSMLNAFSFKIQDKKGRLHRFTCETRSLTEVITSIIQRVGNDIDPNNLPQILYEDEEHDKVLLASDSDLAAAVDHAKAAGLKGLRLHLDFSGVHGYGRDPSLESLEYTSLAWASAYSAVAAGAAIIAGLGLLAFLKRSR* 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g2683 537 ProSiteProfiles CBS domain profile. 49 108 IPR000644 -
Dod04g2683 537 Gene3D - 195 346 IPR046342 -
Dod04g2683 537 Gene3D - 27 180 IPR046342 -
Dod04g2683 537 PANTHER AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT 28 525 - -
Dod04g2683 537 MobiDBLite consensus disorder prediction 1 42 - -
Dod04g2683 537 SUPERFAMILY CAD & PB1 domains 401 492 - -
Dod04g2683 537 CDD CBS_pair_MUG70_1 50 166 - -
Dod04g2683 537 CDD CBS_pair_MUG70_2 220 336 - -
Dod04g2683 537 MobiDBLite consensus disorder prediction 8 37 - -
Dod04g2683 537 PANTHER CBS DOMAIN-CONTAINING PROTEIN CBSCBSPB4-RELATED 28 525 IPR034896 -
Dod04g2683 537 MobiDBLite consensus disorder prediction 370 389 - -
Dod04g2683 537 ProSiteProfiles PB1 domain profile. 402 489 IPR000270 GO:0005515
Dod04g2683 537 Pfam PB1 domain 405 487 IPR000270 GO:0005515
Dod04g2683 537 Pfam CBS domain 51 98 IPR000644 -
Dod04g2683 537 Pfam CBS domain 111 155 IPR000644 -
Dod04g2683 537 Pfam CBS domain 280 330 IPR000644 -
Dod04g2683 537 Pfam CBS domain 220 266 IPR000644 -
Dod04g2683 537 SMART PB1_new 404 489 IPR000270 GO:0005515
Dod04g2683 537 SUPERFAMILY CBS-domain pair 221 334 IPR046342 -
Dod04g2683 537 SMART cbs_1 52 100 IPR000644 -
Dod04g2683 537 SMART cbs_1 118 162 IPR000644 -
Dod04g2683 537 SMART cbs_1 287 335 IPR000644 -
Dod04g2683 537 SMART cbs_1 222 269 IPR000644 -
Dod04g2683 537 SUPERFAMILY CBS-domain pair 42 159 IPR046342 -
Dod04g2683 537 ProSiteProfiles CBS domain profile. 216 276 IPR000644 -
Dod04g2683 537 ProSiteProfiles CBS domain profile. 284 341 IPR000644 -
Dod04g2683 537 ProSiteProfiles CBS domain profile. 115 173 IPR000644 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g2683 Dod-Chr4 50816171 50821335 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g2683 - - gmx:100783514 791.186
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod09g0129 09 2015500 2023629 Dod04g2683 04 50816171 50821335 PCT