Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g0092 ATGGTTGGTGAGAGTGCTGACAGTGTTACTGCTACTGTTGGGTCAGGAAGTAGTGGCAATAAGATGCCAACCTTGGAGGAGTACGGCACCAATTTAACCAAGTTAGCGGAGGAGGGAAAATTGGATCCAGTTGTGGGAAGACAGCAGCAAATTGAACGTGTCACTCAAATTTTAGGTCGTCGCACTAAAAATAATCCTTGTCTTATTGGAGAACCTGGTGTTGGGAAGACAGCAATTGCTGAAGGTCTTGCTCAGAGGATTGCAAATGGTGACGTACCTGAAACCATAGAGGGAAAAAAGGTTATAACCCTTGATATGGGTCTGCTTGTAGCTGGAACTAAGTATCGTGGTGAGTTTGAGGAGAGGTTGAAGAAACTGATGGAGGAAATCAAACAAAGTGATGAGATAATACTTTTTATCGATGAAGTGCACACACTAATTGGAGCAGGAGCGGCTGAAGGGGCAATTGATGCTGCTAACATCCTAAAACCTGCTCTTGCAAGAGGTGAACTGCAGTGTATTGGAGCCACCACACTGGATGAATACAGGAAGCACATTGAGAAAGATCCAGCTTTGGAGAGACGATTCCAGCCAGTTAGGGTGCCAGAGCCAACTGTAGATGAAACCATACAAATATTGAAAGGACTTAGAGAACGTTATGAAATTCACCACAAGCTCCGCTATACTGATGAGGCTCTTGTAGCTGCTGCACAGCTTTCATACCAGTATATCAGTGATCGATTTTTGCCTGACAAAGCTATAGATTTGATTGATGAAGCTGGTTCTCGAGTCCGGCTTCAACATGCGCAGTTGCCTGAAGAAGCAAGAGAACTTGACAAGGAGCTCAGGCAGATTGTTAAGGAGAAAGAAGAAGCTGTTCGCAACCAAGACTTTGAAAAGGCTGGAGAGCTACGAGACAAAGAAATGGATCTGAAGGCTCAAATCTCGACACTTGTAGAGAAAGGACAAGGAGATGAGCAAGGCAGAGAGTGA 993 0.4471 MVGESADSVTATVGSGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQQQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIANGDVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPVRVPEPTVDETIQILKGLRERYEIHHKLRYTDEALVAAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLQHAQLPEEARELDKELRQIVKEKEEAVRNQDFEKAGELRDKEMDLKAQISTLVEKGQGDEQGRE* 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g0092 330 MobiDBLite consensus disorder prediction 1 25 - -
Dod09g0092 330 Gene3D - 13 205 IPR027417 -
Dod09g0092 330 ProSiteProfiles UVR domain profile. 279 314 IPR001943 GO:0005515
Dod09g0092 330 ProSitePatterns Chaperonins clpA/B signature 1. 157 169 IPR018368 GO:0005524
Dod09g0092 330 Gene3D - 207 270 - -
Dod09g0092 330 Coils Coil 275 295 - -
Dod09g0092 330 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 22 298 IPR027417 -
Dod09g0092 330 PANTHER - 1 322 - -
Dod09g0092 330 SMART AAA_5 62 202 IPR003593 -
Dod09g0092 330 Pfam AAA lid domain 205 307 IPR041546 -
Dod09g0092 330 Gene3D UVR domain 271 324 - -
Dod09g0092 330 CDD AAA 45 197 - -
Dod09g0092 330 Pfam ATPase family associated with various cellular activities (AAA) 67 196 IPR003959 GO:0005524|GO:0016887
Dod09g0092 330 Coils Coil 116 136 - -
Dod09g0092 330 MobiDBLite consensus disorder prediction 8 25 - -
Dod09g0092 330 PANTHER ATP-DEPENDENT CLP PROTEASE 1 322 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g0092 Dod-Chr9 1269913 1274224 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g0092 K03696 - gmx:100796195 605.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod09g0092 09 1269913 1274224 Dod09g0092 09 1269913 1274224 ECH
Dod04g2644 04 50333968 50339278 Dod09g0092 09 1269913 1274224 PCT