Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g0077 ATGGAGGAGTCAGTGATTGGTGATCAGGCTAGAAGATCAACACTAGATCCCAAACAAGAAGAACAAAGAGCCTCCTCCCAAGATGAGGGCGCATTGAAGGGCAGCACTGATGCGGAGCTCACAAAAATCCGTCTCATGAGAGCCTTTGTTGAGAGCCAGGATCCCTCTTCTAAGGTTGAAGTAGATGATTTGACCCTTAGAAGATTCTTGAGAGCTCGTGATTTGGATGTGGAGAAAGGTTCGGCTATGTTCCTCAAGTACTTGAAATGGAGACGTTCGTTTCTGCCGAATGATTCTGTATCTCCCTCGGACATTGCTGATGAACTTGCACAGGGCAAGGTGTTCTCCCAAGGATTCGATAAGCAGGGTCGACCTATAACTGTTGCCTTTGCTGCCAAACATTTTCAAAACAAAGATGGTGGGGATGGATTCAAAAGGTTTGTAGTCTTTGTTATTGATAAACTATGCTCAAGGATGCCACGAGGGCAAGAAAAGTTTTGTGCTATAGCAGATATTAAGGGATGGGCATATGCAAACAGCGACATTCGCGGATACCTTAATGCTCTGACAATTTTGCAGGATTATAACCCAGAAAGACTTGGGAAGTGTTTTATTGTCCATGCACCTTACCTGTTTATGAAAGTATGGAATATTATCTATCCTTTCATTGACAACAATACCAAGAAGAAGATAGTATTTGTGGAGAACAAAAAGCTGAAATCAACACTGCTAGAAGACATAGATGAGAGTCAACTCCCCGAGATATACGGAGGTAAACTGCCATTAGTCCCAATCCAAGATTGCTGA 807 0.43 MEESVIGDQARRSTLDPKQEEQRASSQDEGALKGSTDAELTKIRLMRAFVESQDPSSKVEVDDLTLRRFLRARDLDVEKGSAMFLKYLKWRRSFLPNDSVSPSDIADELAQGKVFSQGFDKQGRPITVAFAAKHFQNKDGGDGFKRFVVFVIDKLCSRMPRGQEKFCAIADIKGWAYANSDIRGYLNALTILQDYNPERLGKCFIVHAPYLFMKVWNIIYPFIDNNTKKKIVFVENKKLKSTLLEDIDESQLPEIYGGKLPLVPIQDC* 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g0077 268 SUPERFAMILY CRAL/TRIO N-terminal domain 32 98 IPR036273 -
Dod09g0077 268 MobiDBLite consensus disorder prediction 1 35 - -
Dod09g0077 268 SMART CRAL_TRIO_N_2 62 87 IPR011074 -
Dod09g0077 268 PANTHER OS03G0850700 PROTEIN 19 268 - -
Dod09g0077 268 SMART sec14_4 108 261 IPR001251 -
Dod09g0077 268 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 102 264 IPR001251 -
Dod09g0077 268 SUPERFAMILY CRAL/TRIO domain 103 261 IPR036865 -
Dod09g0077 268 MobiDBLite consensus disorder prediction 1 27 - -
Dod09g0077 268 Gene3D - 6 266 IPR036865 -
Dod09g0077 268 Pfam CRAL/TRIO domain 111 258 IPR001251 -
Dod09g0077 268 CDD SEC14 114 259 IPR001251 -
Dod09g0077 268 PANTHER POLYPHOSPHOINOSITIDE-BINDING PROTEIN 19 268 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g0077 Dod-Chr9 1060231 1062694 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g0077 66 254 Acyl Lipid Metabolism Gene Families AT1G55840 27.404 6.69e-12 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g0077 - - gmx:100797666 402.134
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod09g0077 09 1060231 1062694 Dod09g0077 09 1060231 1062694 ECH
Dod04g2633 04 50177493 50184962 Dod09g0077 09 1060231 1062694 PCT