Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g2633 ATGGCTTGCCCTGAGAGATCAACATTAGATCAATTGAACTCTGCAGCCAGAGAAGGATCATTAGCGCAAGTGGTTGAAGATGATGGTGGCGTAATGAAAGATAGCACTGAAGCCGAGCTAACCAAAATTCATCTTATGAGAGCTTTCCTTGAATCACAGGATCCCTCTGTAAAGAATGAAGTGGATGATTTTATGATTAGAAGATTCCTGCGGGCTCGGGGTCTAGATGTGGAGAAGGCTTCTGCAATGTTCTTCAGGTACTGGAAATGGAGGCGTTCATTTGTTCCAAATGGTTCTCTCTCTCCTTCAGAGGTTCCCAATGAACTTGCACAGAGCAAGATGTTCGCACAAGGACACGATAAGAGAGGTCGACCAATTACTGTTGTCTTTGGTGCTAGACATTTTCAGAACAAAGTTGGAGGTCTTGATGAATTCAAACGTTTTGTAGTCTATGGTCTTGATAAACTATGTGCCAGGATGCCAGCAGGGCAAGAAAAATTTGTTGGCATAGGAGAACTAAAGGGATGGGGATATTCAAACAGTGATGTGCGTGGATACATTGCTGCTCTAACCATTTTGCAGTGCTACTACCCGGAAAGATTGGGGAAGTTGTTTATTGTCAACGCACCTTTCATTTTTATGAAAGTGTGGAAAATTATTTACCCGTTCATTGACAACGAAACCAAGAAGAAGATAGTATTCGTGGAGAACAAGAAGCTAAAATCAACACTGCTAGAAGATATAGACGAAAGTCAGCTCCCAGAGATATACGGAGGCCCACTGCCATTAATCCCCATCCAAGATTGCTGA 810 0.4272 MACPERSTLDQLNSAAREGSLAQVVEDDGGVMKDSTEAELTKIHLMRAFLESQDPSVKNEVDDFMIRRFLRARGLDVEKASAMFFRYWKWRRSFVPNGSLSPSEVPNELAQSKMFAQGHDKRGRPITVVFGARHFQNKVGGLDEFKRFVVYGLDKLCARMPAGQEKFVGIGELKGWGYSNSDVRGYIAALTILQCYYPERLGKLFIVNAPFIFMKVWKIIYPFIDNETKKKIVFVENKKLKSTLLEDIDESQLPEIYGGPLPLIPIQDC* 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g2633 269 SUPERFAMILY CRAL/TRIO N-terminal domain 32 97 IPR036273 -
Dod04g2633 269 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 102 265 IPR001251 -
Dod04g2633 269 PANTHER POLYPHOSPHOINOSITIDE-BINDING PROTEIN 32 269 - -
Dod04g2633 269 SMART CRAL_TRIO_N_2 62 87 IPR011074 -
Dod04g2633 269 Gene3D - 12 264 IPR036865 -
Dod04g2633 269 Pfam CRAL/TRIO domain 112 259 IPR001251 -
Dod04g2633 269 PANTHER OS03G0850700 PROTEIN 32 269 - -
Dod04g2633 269 SMART sec14_4 108 262 IPR001251 -
Dod04g2633 269 CDD SEC14 118 259 IPR001251 -
Dod04g2633 269 SUPERFAMILY CRAL/TRIO domain 103 262 IPR036865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g2633 Dod-Chr4 50177493 50184962 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g2633 68 255 Acyl Lipid Metabolism Gene Families AT5G47730 26.601 1.29e-12 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g2633 - - aip:107634602 385.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g2633 04 50177493 50184962 Dod09g0077 09 1060231 1062694 PCT