Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g0009 ATGGGTCTGTTCAAACGTAAGGGGGCTGTTTACAGGCCCGTGAAGGATGTTGACTTAGGCCCTTATAGCAGTGAACACTATCTCCAGGCCAATGTCAAAGCTCCCCGCATGACTGGAATTCTGGTCAAGATTTTCACCTTTCTCTTGGAGTTTCCCATGGTTGGAACCTTGCTGTTGTACATATTGAAGGGAAACAATCTTATTCATGAGCTTGTTACAAATGCAGATTTGCAAGAGTCACCTCTCTTCGTTCCCTTGCATCACTTTGAAGATAACAAAGAAAAAGAGGTCAAATGCCTAGATTCTTCTTTATCTCCACCAGAGAAAATTAAGCTTGCAATAGATTGCTTGCCTATATCTTCAGAAGAAACACTTGATAAAGCAAAACCTTCATTCAATCGGTGGACAATTATGGATTATTACAAAGCCTACAGCTCAGGGGTTATAACACCAAGCATGGTTGCAGGACGATTTATAGCAGCTGTTAATGAATCGGTGAAACCTCCATTCCAAATGGGATTCTTTATTGACTACAACCCTGATGATATACTAAGACAAGCAAATGAATCAACTCTTAGATATAAAGCAGGGGAACCTATCTCTGTGCTTGATGGAGTTCCTGTTGCTGTCAAGGATGAAATAGATTGTTTGCCATATCCCACAACAGGAGGTACAAAGTGGCTGCACAAAGAAAGGCCTTGTAAAGATGATGCTTGCTGTGTTAAGCGTCTAAGACTATGCGGTGCCATACTTGTTGGGAAAACCAATATGCATGAACTTGGATCTGGAACTAGTGGGATCAATCCACATTATGGGCCTGCTAGAAACCCCTATGATAGCAGTAAGATTACAGGAGGTTCTTCCAGTGGATCTGCTGCTGTGGTGGCTGCAGGACTGTGCCCTGTTGCTCTTGGTGTTGATGGTGGAGGATCTGTAAGGATGCCTGCAGCTCTTTGTGGTGTTTTTGGTCTGAAACCAACTTTTGCACGCGTACCTCATGCTGGAGTTCTTCCCTTAAACTGGACAGTTGGGATGGTTGGAGTACTAGGAGGCAATGTCGAGGATGCATTGATTGTTTATGCAGCCATCGGTGGTGAAATTCCATCCCATCAGCCCTCCATTACACCACCCAAGATAAATCTTCCACTGCTGAGCTTAACAAAGTCTATATCTGACATCAAGCTGGCTAAATATGGGAAGTGGTTTGATGATAGCAGTGATGATGTCAGAATATGCTGCTCCCTAGCTTTGCACAAGCTTCAGGATCATTATGGTTGGAAGACTTTAGATGTCACCATACCAGAGATAGAGGTGATGCGTTTGGCACATTACTCAACAATTGGATCAGAGTGTTCAACTTCGCTTAGTTCTTTTAAAGAAAAGAATTTTGCAGAATTAGGATGGGATGCAAGGGTAGCACTAAACATCTATGGTGCTTTCAGTAGCTTGGAGTATCTTAATGCTCAAAGGATTAGGAATCGACAATTGCAATTTCACATGAAAATATTTGCTGAGGCTGATGTCATTGTTTCACCAACAACGGGTGTGACAGCATATCCTATCCAAGATGATGCACTGAAGACCGGTGAACTTGACTATGTCAATGGAGCTGCACTTGTTCGTTATTCCATAGCAGGAAACTTTCTGGGACTTCCTGCTGTCACTGTTCCGGTTGGATATGATAAATTGGGTTTGCCTATTGGTCTTCAGTTTATTGGGAGGCCTTGGTCTGAAGCAACACTCATCCACTTAGCATATGCAATGCAGGCCATCTGCATGTCAGGTTACAAAAAACCAAAGCTTTACTATGATTTGCTTAGAAGATAA 1827 0.4275 MGLFKRKGAVYRPVKDVDLGPYSSEHYLQANVKAPRMTGILVKIFTFLLEFPMVGTLLLYILKGNNLIHELVTNADLQESPLFVPLHHFEDNKEKEVKCLDSSLSPPEKIKLAIDCLPISSEETLDKAKPSFNRWTIMDYYKAYSSGVITPSMVAGRFIAAVNESVKPPFQMGFFIDYNPDDILRQANESTLRYKAGEPISVLDGVPVAVKDEIDCLPYPTTGGTKWLHKERPCKDDACCVKRLRLCGAILVGKTNMHELGSGTSGINPHYGPARNPYDSSKITGGSSSGSAAVVAAGLCPVALGVDGGGSVRMPAALCGVFGLKPTFARVPHAGVLPLNWTVGMVGVLGGNVEDALIVYAAIGGEIPSHQPSITPPKINLPLLSLTKSISDIKLAKYGKWFDDSSDDVRICCSLALHKLQDHYGWKTLDVTIPEIEVMRLAHYSTIGSECSTSLSSFKEKNFAELGWDARVALNIYGAFSSLEYLNAQRIRNRQLQFHMKIFAEADVIVSPTTGVTAYPIQDDALKTGELDYVNGAALVRYSIAGNFLGLPAVTVPVGYDKLGLPIGLQFIGRPWSEATLIHLAYAMQAICMSGYKKPKLYYDLLRR* 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g0009 608 PANTHER TRANSAMIDASE 1 608 IPR000120 GO:0003824
Dod09g0009 608 SUPERFAMILY Amidase signature (AS) enzymes 132 591 IPR036928 -
Dod09g0009 608 Pfam Amidase 179 581 IPR023631 -
Dod09g0009 608 Gene3D Amidase signature (AS) domain 137 593 IPR036928 -
Dod09g0009 608 PANTHER FATTY ACID AMIDE HYDROLASE-LIKE PROTEIN 1 608 - -
Dod09g0009 608 ProSitePatterns Amidases signature. 285 316 IPR020556 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g0009 Dod-Chr9 264430 270705 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g0009 7 606 Acyl Lipid Metabolism Gene Families AT5G64440 44.262 1.86e-170 496
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g0009 - - gmx:100775876 1028.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g2577 04 49659709 49666020 Dod09g0009 09 264430 270705 ECH
Dod09g0009 09 264430 270705 Dod09g0009 09 264430 270705 ECH