Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g2577 ATGGGTTGGTTCAAAAGTAAGGGTGTGGTTTACGGTCCTGTGAAGGATGTCAATTTAGGCCCTGATAGCACTGAATTCTATATCCAAACAAATGTCAAAGCTCCCCGGATGGCTGGGATTATGGTCAAGATTTTCACTTGGTTCTTAGAATCTCGAATATTTGGAGCCTCGCTATTGTATATATTGAAGGAAACCAATCTTATCCATAAGTTTATTACAAATGCAGAGTTAGAAGAGTCACCCCTCTATGTTCCCTTACATCATTTTGAAGACTCCAAAGAACAAGAAGTCAAATGCTTAGATTCTGCTTTAACTCCACCAGAGCAAGTTCAACTTGCAGTAGAGTGCTTGCCTACATCTTCAGAAAATGTACTTAATGGAAAAAAGCCTTCATTCTGTCGTTGGACAATAATGGATTATTATAGAGCCTACAACTCAGGGAATATAACACCACGCATGGTTGCAGAACGATTTATAGCTGCCGTCGGTGAATCTTCAAAACCTCCATTCCAAATGGGATTCTTTATTAACTACAATACTGAAGATATACGGAGACAAGCAGATGAATCAACTCTTAGATATCAGAAAGGGGAACCTATCTCTGTGCTAGATGGAATTCTTGTTGCTATCAAGGATGAAATAGATTGTTTGCCATATCCTACCACAGGTAGAGGTACAAAGTGCCTGCACAAACAACGGCCTTGTGCAGATGATGCTAGCTGTGTTAAGCGTCTGAGATTATGCGGCGCCATACTTGTTGGGAAGACTAATATGCATGAACTTGGGTCTGGAACTAGTGGCATTAATCCTCATTATGGGGCTACTAGGAATCCATACAATACCAATAAGATTTCAGGAGGTTCTTCTAGTGGATCGGCTGCTGTGGTGTCTGCAGGGCTGTGTCCTATTGCCCTAGGTGTTGATGGGGGAGGATCTGTCAGGATACCTGCAGCTCTTTGTGGTGTTGTTGGTCTGAAACCAACTTTTGGTCGTTTACCTCATTCTGGAGTTCTTCCCCTGAACTTTACAGTTGGGATGGTTGGAATCCTAGCAGGCACTGTTGAGGATACATTGATCACGTTAGTAGTCCTTTCTTTGATATTCTTTCTTCTAACAAGTTTTAAGATCGGTTGTACAGCTTCTGAGGCTTCAATAAATCTTCCCCTGCTGCCATTGACAAAGTCCATATCTGACATCAAGTTGGCAAAATATGGGAAGTGGTTTGATCATTGCAGTCATGATGTCAGAATATGCTGCTCTCATGCTTTGAACAAACTTCAGCATCAGTATGGTTGGAAGATCATAGATGTCACTATACCAGAAATAGAAACAGTGCAACTGGCACATTATTTAACACTGGGATCAGAGTGTTCCGCTTCGTTTGATTCTTTTAGAGAAAAAAATTTTGCAGAACTGGGATGGGATACAAGGGTAGCAATTAACCTGTATGGTGCTTTCAGCAGCATGGAGTATATTAAAGCTCAGAAAATTAGGAATCGCCAGTTGCAGTTTCACAAGAAAATATTAGCTCAGGCAGATGTCATTGTGTCTCCAACAACAGGCATGACAGCATACCCAATTCGAGATGATGCCCTGAAGACTGGTGAACTTGACTACATCAATGGAGCTGCACTGGTCCGGTATTCCATGTTAGGAAACTTTCTGGGACTTCCTGCAGTGACTATTGCGGTTGGATATGATAAGTTAGGTTTGCCTATTGGTCTTCAATTTATAGGAAGGCCTTGGGCTGAAGCAACACTGATCCACTTGGCATTTGCAATGCAGTCCTTTTCTTTTGTTTTGGTCACATTCTCCTATTGTTGTCAAGACAAGTTAATGTACTTAATGCCTAGGTTTCCCTTTTTGCCACATGATGCAAAATCACTGACCTTACGGCTGGGTAAAGAACGTGCAATTATGGGAAGATATACACAAGGTAATAATGAGATGCTGCAATTTGTATTGTTATGA 1971 0.4135 MGWFKSKGVVYGPVKDVNLGPDSTEFYIQTNVKAPRMAGIMVKIFTWFLESRIFGASLLYILKETNLIHKFITNAELEESPLYVPLHHFEDSKEQEVKCLDSALTPPEQVQLAVECLPTSSENVLNGKKPSFCRWTIMDYYRAYNSGNITPRMVAERFIAAVGESSKPPFQMGFFINYNTEDIRRQADESTLRYQKGEPISVLDGILVAIKDEIDCLPYPTTGRGTKCLHKQRPCADDASCVKRLRLCGAILVGKTNMHELGSGTSGINPHYGATRNPYNTNKISGGSSSGSAAVVSAGLCPIALGVDGGGSVRIPAALCGVVGLKPTFGRLPHSGVLPLNFTVGMVGILAGTVEDTLITLVVLSLIFFLLTSFKIGCTASEASINLPLLPLTKSISDIKLAKYGKWFDHCSHDVRICCSHALNKLQHQYGWKIIDVTIPEIETVQLAHYLTLGSECSASFDSFREKNFAELGWDTRVAINLYGAFSSMEYIKAQKIRNRQLQFHKKILAQADVIVSPTTGMTAYPIRDDALKTGELDYINGAALVRYSMLGNFLGLPAVTIAVGYDKLGLPIGLQFIGRPWAEATLIHLAFAMQSFSFVLVTFSYCCQDKLMYLMPRFPFLPHDAKSLTLRLGKERAIMGRYTQGNNEMLQFVLL* 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g2577 656 Gene3D Amidase signature (AS) domain 137 598 IPR036928 -
Dod04g2577 656 ProSitePatterns Amidases signature. 286 317 IPR020556 -
Dod04g2577 656 Pfam Amidase 180 587 IPR023631 -
Dod04g2577 656 SUPERFAMILY Amidase signature (AS) enzymes 131 596 IPR036928 -
Dod04g2577 656 PANTHER TRANSAMIDASE 1 598 IPR000120 GO:0003824
Dod04g2577 656 PANTHER FATTY ACID AMIDE HYDROLASE-LIKE PROTEIN 1 598 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g2577 Dod-Chr4 49659709 49666020 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g2577 23 600 Acyl Lipid Metabolism Gene Families AT5G64440 41.414 1.18e-148 442
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g2577 - - gmx:100784118 950.658
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g2577 04 49659709 49666020 Dod09g0009 09 264430 270705 ECH
Dod04g2577 04 49659709 49666020 Dod04g2577 04 49659709 49666020 ECH