Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1157 ATGGGCGGTGGTTGGAGAGGAGTTTTTTGCACCCGCGACCCAGAATCCACAGTAGATAAGCAACACCAAAGCCAAAGCTCCACCCCTTCCCCGAGAAGCTGCGTCAGACAGGGATTTCTCTCAAACGCGGAAGAAGCATCACAACCAGCCTCTCCTCGCTCCCCAAGCTTCAAGTTATCCCTCTTCAGAAACAGCTTCAAATTCAGAAGGAACTGCGGAATCTGTTTGAATGGCATGAAGACAGGGCAGGGAACCGCCATTTACACTGCGGAATGCGGTCACGCTTTTCACTTCCCCTGCATCGCCGTCCACGTCAGCCATCTCGCCTGCCCCGTCTGCAACGCCACCTGGAAAGACGTTCCTGCCCTCGCGCACCAAAACGACGTTGTCGCCGAAACCGAAAAAAGGCATTCTGATTTGGTCAGGCTCTACGACGACGACGAGCCTCTCCCTTCTCCCTTCTCCGGCACTCGAATCGCTACCATTCCAGAAGCCGATGAAGAAAACGACGACGAAGAAAACCAAAACGACGAGTTATTCCAGGGCTTTGTCGTCAATCCAAATCCTCCAGTAAACGACGCTGATTCCAGGAGCGTTCGGGTGAAGCTGATGCCAGAGTGTGCCATCATATCAGCGTCGCAAAGCCACAAGACTTATGCTTTGGTTCTAAGGGTGATGGCTCCGCCGCCACCTCCTCGGGACGCCGCCGCTCCGCCGGTGGATGTCGTGGCGGTAGTCGACGTCGGCATGACCGGCGCGAAGCTTCACATGCTGAAGCGCGCGATGCGTTTGTTAATCTCCTCTCTCAGCTCGGCTGACCGGATCGCCGTCGTGGCTTCCTCGGCTTCATCCAAACGGCTGATGCCACTCCGGAGAATGACGCCGCAGGGACAGAGCGCGGCGCGGCGCGTCGTTGACTCAGTCGCCTCCGGCGACGGAACCGCGGCCGCCACCGCTGTCGGCGAAGCTTTCAGAAAAGCCGCGAAGGTTCTAGAAGACCGGCGGGAGAGAAACCCTGTCGCTTGGCTCCTCCTCTTTTCAAACGGTCAAGACGAGAGCGGTGAGAAGATCCAAAGAAGTAACACTAACAAACAACGGCAACGCTTCAGCTTCGGCCACGTGTCCTCTTCGGGGTTCAGTTTTATTGAGATCCCGGTTCACTCGTTTGGGTTCGGGAATAAAACCGGGTTCGTGAGCGAGCCGGCTGAGGATAATTTCGCGAAGCACGTTGAGGGGATTTTAAGTGTGGTGGTGCAGGATTTAAGATTCCAGCTCGGCGTTTCTGCACCAGATGTAATCAGAGCCGTCTACTCGTGTAACGGGCGGCCCACAGCGCTTGGATTTGGAGCCTTTCGGATCGGCGGTTTATACGCCGAAGAGGAGAGAGAGCTGTTGGTGGAGTTGAGGGTGCCCACGTCAGCATTGGGGACCCACCACGTGATGAACGTGAGGTGTATCTATAAAGATCCCGTGAACAGAAAGATAGTGTGCGGTTGGGAACACGCGCTTCCGGTGGAGCTGCGGCTCGGTGGCAGAAGCGAGCGGCTTAAGAATGTGTTTATAACGAGCCGAGCCATAGCCGAGTCGGGGAGGCTGGTGGAGAAGAACGAGTTTTCGAGTGCTTATTATTTGGTGGCTTCGGCTCGGGAGCTATTGGCTTGTTGTGGCTCGGGTTCAGCTGTGGAGTGCTTCCGCAGCTTGGATGCTGAGCTGGCAGAGATTCTGCGGCGGAAAGAGCAGCAAGGGAGAGTGAGGTTGGCGGGTGAGAACGGTGGTGATGAAGTGTTGACTCCGACGTCGGCTTGGAGAGCGGCTGAGAGGCTGGCTAAGATGTCCATGATGAAAAACTCGTTGAATAGGGTCAGTGACTTGTACGGCTTCGAAGATGCTAGGTTTTAA 1899 0.5587 MGGGWRGVFCTRDPESTVDKQHQSQSSTPSPRSCVRQGFLSNAEEASQPASPRSPSFKLSLFRNSFKFRRNCGICLNGMKTGQGTAIYTAECGHAFHFPCIAVHVSHLACPVCNATWKDVPALAHQNDVVAETEKRHSDLVRLYDDDEPLPSPFSGTRIATIPEADEENDDEENQNDELFQGFVVNPNPPVNDADSRSVRVKLMPECAIISASQSHKTYALVLRVMAPPPPPRDAAAPPVDVVAVVDVGMTGAKLHMLKRAMRLLISSLSSADRIAVVASSASSKRLMPLRRMTPQGQSAARRVVDSVASGDGTAAATAVGEAFRKAAKVLEDRRERNPVAWLLLFSNGQDESGEKIQRSNTNKQRQRFSFGHVSSSGFSFIEIPVHSFGFGNKTGFVSEPAEDNFAKHVEGILSVVVQDLRFQLGVSAPDVIRAVYSCNGRPTALGFGAFRIGGLYAEEERELLVELRVPTSALGTHHVMNVRCIYKDPVNRKIVCGWEHALPVELRLGGRSERLKNVFITSRAIAESGRLVEKNEFSSAYYLVASARELLACCGSGSAVECFRSLDAELAEILRRKEQQGRVRLAGENGGDEVLTPTSAWRAAERLAKMSMMKNSLNRVSDLYGFEDARF* 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1157 632 MobiDBLite consensus disorder prediction 1 35 - -
Dod08g1157 632 SUPERFAMILY RING/U-box 66 120 - -
Dod08g1157 632 SMART VWA_4 239 422 IPR002035 -
Dod08g1157 632 CDD RING-H2 72 114 - -
Dod08g1157 632 ProSiteProfiles Zinc finger RING-type profile. 72 114 IPR001841 -
Dod08g1157 632 Pfam RING-like zinc finger 71 101 IPR001841 -
Dod08g1157 632 MobiDBLite consensus disorder prediction 20 35 - -
Dod08g1157 632 SMART ring_2 72 113 IPR001841 -
Dod08g1157 632 PANTHER E3 UBIQUITIN-PROTEIN LIGASE WAV3 23 632 - -
Dod08g1157 632 PANTHER CALCIUM-ACTIVATED CHLORIDE CHANNEL REGULATOR 23 632 - -
Dod08g1157 632 Gene3D von Willebrand factor, type A domain 241 413 IPR036465 -
Dod08g1157 632 SUPERFAMILY vWA-like 238 396 IPR036465 -
Dod08g1157 632 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 36 119 IPR013083 -
Dod08g1157 632 Pfam von Willebrand factor type A domain 250 349 IPR002035 -
Dod08g1157 632 ProSiteProfiles VWFA domain profile. 241 436 IPR002035 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g1157 Dod-Chr8 14886393 14888974 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g1157 - - gmx:100795015 620.542
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g1157 08 14886393 14888974 Dod04g0415 04 5431722 5435046 ECH
Dod08g1157 08 14886393 14888974 Dod08g1157 08 14886393 14888974 ECH