Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g0415 ATGGTTTCAGTTGATAATGGAATTGGTAATCCCAAAGATGAAATTGTGGAGTGGGAGTCTAATGGAAGTAAAGTGAAGGAGTTTGCTTCCGTAGATATTGCAACTTCTCAACAGACATTTCTGAACGGTGAAAATCCTCAGGGCACCTCGAGTTCTCTTCCTGATAGGATCAAGTCCCTCAAGTTTGGTTCAGCATCTTCCAAGTTAAATCGTCTTGCTACTGAGGGAGACCAGATTTCACAATCTGTGCCTTCTCCTCGTTCTCATAGCCTGAGAGCACGCTTTAATGGCATGTTTGCTCAGAAACTTGACTGGGGTTCAGTCAAGAAAATGTGCATGGAATGGATTAGAAACCCAATGCATATGGCCCTATTTTTGTGGATCATCTGTGTTGCTGTTTCAGGTGCAATTCTGTTCCTTGTTATGACAGGGATGTTGAATAGTGTGTTACCAAGAAAATCTGAGAGAAATGCATGGTTTGAGGTAAACAACCAAATACTCAATGCATTGTTTACACTCATGTGTTTGTACCAACATCCAAAGAGGTTCTACCACCTTGTTCTTCTGTGCAGATGGAAACCAAATGACATCTATAGGCTTAGGAAGGTATACTGCAAGAATGGCACTTATAAGCCTAATGAGTGGGGACACATTATGGTAGTGGTCACTCTACTTCATGCGAACTGTTTTTCTCAATATGCACTTTGTGGTCTAAACTTGGGGTATAAAAGGTCTGAGAGGCCTGCCATAGGAGTTGGAATATGTATATCTTTTGCAATTGCTACTCCTGCAATTGCAGGTCTGTACACCATTCTCAGCCCGCTTGGGAGAGACTATGATTGTGAAATGGATGAAGAAGCACAGGTCCAACCAGCTGCTGCTCAAGGGCAAGAGCAGCTGAGAGAAAAACCATTTGAGAAGAAATATTCGTTTGCGTCCAAGGATCAACAAAAAATTATTGAAAACAAACCGAAGTGGAGTGGAGGAATACTTGACATTTGGGACGATATTTCTGTAGCATATCTTTCACTTTTCTGCACTTTCTGTGTCTTCGGATGGAATATGGAGAGACTTGGCTTCGGAAACATGTATGTTCATATTGCCACTTTTATGCTGTTCTGTATGGCACCTTTCTGGATTTTTACCTTGGCTGCTGTTAACATTGATGATGATGAAGTTAGACAAGGACTGGTAGCTATTGGTATTATTCTTTGTGTTTTGGGTTTATTGTATGGTGGCTTTTGGAGGATCCAAATGAGAAAGAGGTTCAATTTACCTGCTTATAACTTGTGTTTTGGTAAACCTTCAATTACTGATTGCACCCTTTGGCTATGCTTTTGTTGGTGCTCTCTAGCGCAAGAAGCACGGACTGGCAATAACTATGATCTTGTTGTAGAAGATAAATTCTCCAGAAAAGAAATTGATACTGATAACCAACTGTCGAATTCCCCTTTGGCTCGGGAAGTAGTAGTATCAACCAAATCTGGCCCAAGTTCTCCTCAGGTTAACAAATCTTCCCCTTTTATGCCAGAAACATCTAGTTCTCTAAGTTCAAGCAATGTCTTAAGCGAATACTATAGTCCAGATAGGCAACTACCTAATGCAAAAGAAGAGCATTTTGAAAGAGGTAAAGATGGCATAATGAACCCACCGACCCTGTCATCAATGCAAAGAGAAGCTCCCTAG 1686 0.411 MVSVDNGIGNPKDEIVEWESNGSKVKEFASVDIATSQQTFLNGENPQGTSSSLPDRIKSLKFGSASSKLNRLATEGDQISQSVPSPRSHSLRARFNGMFAQKLDWGSVKKMCMEWIRNPMHMALFLWIICVAVSGAILFLVMTGMLNSVLPRKSERNAWFEVNNQILNALFTLMCLYQHPKRFYHLVLLCRWKPNDIYRLRKVYCKNGTYKPNEWGHIMVVVTLLHANCFSQYALCGLNLGYKRSERPAIGVGICISFAIATPAIAGLYTILSPLGRDYDCEMDEEAQVQPAAAQGQEQLREKPFEKKYSFASKDQQKIIENKPKWSGGILDIWDDISVAYLSLFCTFCVFGWNMERLGFGNMYVHIATFMLFCMAPFWIFTLAAVNIDDDEVRQGLVAIGIILCVLGLLYGGFWRIQMRKRFNLPAYNLCFGKPSITDCTLWLCFCWCSLAQEARTGNNYDLVVEDKFSRKEIDTDNQLSNSPLAREVVVSTKSGPSSPQVNKSSPFMPETSSSLSSSNVLSEYYSPDRQLPNAKEEHFERGKDGIMNPPTLSSMQREAP* 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g0415 561 PANTHER PLAC8 FAMILY PROTEIN-RELATED 16 559 - -
Dod04g0415 561 Pfam PLAC8 family 326 456 IPR006461 -
Dod04g0415 561 MobiDBLite consensus disorder prediction 531 545 - -
Dod04g0415 561 TIGRFAM A_thal_Cys_rich: uncharacterized Cys-rich domain 325 457 IPR006461 -
Dod04g0415 561 MobiDBLite consensus disorder prediction 489 561 - -
Dod04g0415 561 MobiDBLite consensus disorder prediction 489 527 - -
Dod04g0415 561 Pfam Protein of unknown function (DUF2985) 114 192 IPR021369 -
Dod04g0415 561 PANTHER - 16 559 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g0415 Dod-Chr4 5431722 5435046 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g0415 - - gmx:100811964 882.863
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g1157 08 14886393 14888974 Dod04g0415 04 5431722 5435046 ECH
Dod04g0415 04 5431722 5435046 Dod04g0415 04 5431722 5435046 ECH
Dod04g0415 04 5431722 5435046 Dod08g0634 08 7573840 7576614 PCT