Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1058 ATGTCCTCAGGAGGTAGTTTTAGATCAACTTCCTCTGGGAAAAAATCAAAGCACCAGCACTTCCAGGTCTGCTTTTGTTTCCAGAGAATGTTTAAGCTCAGGATGGCTGAACCTCCTGAGGAAATCCGCGTTATCTTTGAAGATTATTCAGAGAGTGGCACCATGAGCGTGGATAACTTGTACAGATTCTTGGTTAAGTTTCAAGGAGAAGAGGCTGGTGATGCCACAAAAAACAAGGCTCAAACCATTTTCGACAGAACTCTCAAGCTGAAGCATCTCAATTTGTTCCAAAGGAAAGGTCTTCATGTTGAGGCCTTCTTCCATTATCTCTTAGGTGACCATAATGGCCCCCTTGCTGAGGTGCAACATGACATGAATTCTCCATTGGCTCATTATTTCTTATACACTGGCCATAATTCCTATCTAACAGGAAATCAATTTAGCAGTAAAAGCAGCACTTCCCCAATAATAAAGGCACTGAAGAAAGGTGTAAGAGTTATTGAACTGGATTTGTGGCCAAATTCCAGGGGGAATGGTGTTGACGTTCGTCATGGAGGGACAATGACTAGTCCAGTGACACTCGAAGATTGCTTGAAAGCCATTAAGGAAAATGCATTTTATGCTTCTGAGTATCCTGTTGTCATAACTTTTGAAGACCATATAACTCGACCTCTCCAAGCCAAAGTTGCCAAGATGGTCAATGACATATTTGGAAACATGCTGCATCGCCCTGATTCACAACACATGGAGCAGTTCCCTTCTCCAGAATCATTGAGGCAAAAAATTCTGATCTCAACGAAACCACCAGAAAATCCTGAAGATCAAGGGGCGAGTGTACAAGAGCAAGGAGCAGAGCGTTCTGAGGATACCTATGACACCTACGAGCAGTATGATTCAGATTACCAGAGTGAGGAGGATGATGGTCTTGAATATAGGAATTTGATTTCCATTCATGCAGGGAAGCCAAAAGGGCATATAGAAAACTGGTTGGTTAGTCACAGTAAAGCCAGGCGTCTTAGCTTGAGTGAAGATCAGCTTGAAGATATTGTTAGAACACATGGAACTGACATTGTCAGATTCACCCAAAAGAATATGCTTAGAATATATCCAAAGGCCACACGGGTGGACTCATCTAATTATGACCCCATGGTTGGATGGATGCATGGAGCTCAAATGGTAGCATTTAATATGCAGGGACATGGGCACTATCTTAGGATGATGGAAGGAATGTTCAGAGCCAATCGTGGCTGTGGCTATGTTAAGAAACCAGATATCTTGTTGAATGTTGGCCCCAAGAATGAGGTTTTTGATCCTAGAGCATCCAGACAAATTCAGAAAACACTGCAGGTTTTGGTATACATGGGTGAAGGGTGGCATGCAGATTTTAACACAACAGACTTCGATTTTTATTCTCCTCCTGACTTCAGTGTACGGCTTCATATCCATGGTGTCCCAGCTGACACAAATACCAAAACAACAAGAACAATTGAAGACCAATGGGTACCGGTATGGAATGAGGAGTTCAGCTTTCCACTAACCGTTCCAGAATTGGCCCTCTTGTACATCAAAGTTGTTGAGAATGACTTTTCTGTTTCGCATGATTTTGGTGGACAAACATGTTTACCCGTATCTGAGCTAAGAGAAGGCATCCGCGCGGTTCGCTTGTGTGACCGCACAGGTCAAACTTACAAGTCCACAAGGCTTCTAATCCAATTTCGATTTTGTTAA 1728 0.4282 MSSGGSFRSTSSGKKSKHQHFQVCFCFQRMFKLRMAEPPEEIRVIFEDYSESGTMSVDNLYRFLVKFQGEEAGDATKNKAQTIFDRTLKLKHLNLFQRKGLHVEAFFHYLLGDHNGPLAEVQHDMNSPLAHYFLYTGHNSYLTGNQFSSKSSTSPIIKALKKGVRVIELDLWPNSRGNGVDVRHGGTMTSPVTLEDCLKAIKENAFYASEYPVVITFEDHITRPLQAKVAKMVNDIFGNMLHRPDSQHMEQFPSPESLRQKILISTKPPENPEDQGASVQEQGAERSEDTYDTYEQYDSDYQSEEDDGLEYRNLISIHAGKPKGHIENWLVSHSKARRLSLSEDQLEDIVRTHGTDIVRFTQKNMLRIYPKATRVDSSNYDPMVGWMHGAQMVAFNMQGHGHYLRMMEGMFRANRGCGYVKKPDILLNVGPKNEVFDPRASRQIQKTLQVLVYMGEGWHADFNTTDFDFYSPPDFSVRLHIHGVPADTNTKTTRTIEDQWVPVWNEEFSFPLTVPELALLYIKVVENDFSVSHDFGGQTCLPVSELREGIRAVRLCDRTGQTYKSTRLLIQFRFC* 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1058 575 SMART plcx_3 123 267 IPR000909 -
Dod08g1058 575 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 447 574 IPR035892 -
Dod08g1058 575 SMART plcy_3 311 427 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Dod08g1058 575 SUPERFAMILY EF-hand 30 118 IPR011992 -
Dod08g1058 575 ProSiteProfiles C2 domain profile. 428 557 IPR000008 -
Dod08g1058 575 Pfam C2 domain 449 549 IPR000008 -
Dod08g1058 575 Pfam Phosphatidylinositol-specific phospholipase C, X domain 125 267 IPR000909 -
Dod08g1058 575 PRINTS Phospholipase C signature 251 268 IPR001192 GO:0035556
Dod08g1058 575 PRINTS Phospholipase C signature 365 386 IPR001192 GO:0035556
Dod08g1058 575 PRINTS Phospholipase C signature 154 174 IPR001192 GO:0035556
Dod08g1058 575 PRINTS Phospholipase C signature 541 551 IPR001192 GO:0035556
Dod08g1058 575 PRINTS Phospholipase C signature 386 404 IPR001192 GO:0035556
Dod08g1058 575 PRINTS Phospholipase C signature 128 146 IPR001192 GO:0035556
Dod08g1058 575 SMART C2_3c 447 555 IPR000008 -
Dod08g1058 575 ProSiteProfiles Phosphatidylinositol-specific phospholipase Y-box domain profile. 340 426 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Dod08g1058 575 Gene3D - 35 120 - -
Dod08g1058 575 Gene3D Phosphatidylinositol (PI) phosphodiesterase 121 440 IPR017946 GO:0006629|GO:0008081
Dod08g1058 575 Pfam Phosphoinositide-specific phospholipase C, efhand-like 40 110 IPR015359 -
Dod08g1058 575 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 123 267 - -
Dod08g1058 575 PANTHER PHOSPHOINOSITIDE PHOSPHOLIPASE C 1 19 574 - -
Dod08g1058 575 Pfam Phosphatidylinositol-specific phospholipase C, Y domain 336 424 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Dod08g1058 575 PANTHER PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN 19 574 IPR001192 GO:0035556
Dod08g1058 575 CDD C2_PLC_like 446 574 - -
Dod08g1058 575 SUPERFAMILY PLC-like phosphodiesterases 123 428 IPR017946 GO:0006629|GO:0008081
Dod08g1058 575 Gene3D C2 domain 442 575 IPR035892 -
Dod08g1058 575 MobiDBLite consensus disorder prediction 266 293 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g1058 Dod-Chr8 13394781 13401922 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g1058 19 572 EF-hand Containing Proteins AT5G58670 54.159 0.0 607
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g1058 K05857 - gmx:100817915 827.009
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g1058 08 13394781 13401922 Dod08g1058 08 13394781 13401922 ECH
Dod08g1058 08 13394781 13401922 Dod04g0355 04 4659895 4666292 ECH