Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g0355 ATGGCCACACGCACTTTCAACTACAAAACACTGAGCTGCTTCAACAGGAAGTTCACCATCACCGAACCGGGCCCTCCCCGTGACGTCGCCCAAGCCTTCTCCGCCTTCGCCGCCGGCTCCCCTTCCATGTCCGCCGATCACCTCCTCCGCTTCCTGACCGACCACCAGGGCGAGTTGGACCTCACCGCACAGGATTCCGACCGCATCCTCCGCTCCTTCTTGCAATCGCGGACACCAGCAGATCACGCTGCAGCGGGACTCACCGTCGACGACTTCTTCCACTTCCTCCTCCTCGATGACTTCAACGCTCCCTTGAAATCGCAGGTACATCATGATATGAATGCTCCATTGTCACATTATTTCATATATACAGGGCACAATTCCTATCTGACTGGTAATCAACTGAGCAGTGACTGCAGTGATGTGCCAATCATAAATGCATTGCAACGAGGTGTGCGAGTAATTGAACTAGATTTGTGGCCAAATTCGACTAAAGATGATATCGATGTACTTCATGGAAGGACTCTTACCACTCCCATCTCACTCACCCAATGTTTGAAGTCCATAAAAGAGCATGCTTTTGATAAATCTCACTACCCTGTCATTATAACTTTAGAAGACCACCTTACTCCTGATCTTCAAGCTAAAGTTGCAGAGATGGCCACTCAAATATTTGGAGAACTGCTTTATTACCCTGAGACAGATTCTCTAACTGAATTCCCCACACCAGAATCATTGAAAGGTCGAATTCTTATATCGACCAAACCACCGAAAGAGTATCTTGAATCCAAGAATTATGATGACGAGGTCAATGAAAGGGAATCAGCTGACAAAGGATTGTCATCTCCAGACCTTACTAATGAGGTGGAAACTGATGACAGAGATGAGGAAGAATTGAATGCATGTGATGAGAAATCATATCAGCAGGGTGCACCTGAGTATAAACGTCTGATTACCATCCATGCTGGGAAATCAAAGGGTGATGTGCAGGATGACTTAAAAGTCGTTGGTGACGTTAGACGTTTGAGCTTGAGCGAACAGAAACTGGAAAAGGCTTCTGAATCTTATGGACCTGATATTGTTAGGTTTACACAGAAGCATATTCTTAGAGTGTATCCAAAAGGAACACGCCTCAACTCCTCAAATTACAAGCCCCACATAGGGTGGACATACGGAGCTCAGATGGTTGCATTTAACATGCAGAGGCATGGCAAATCACTCTGGTTCATGCAAGGGATGTTTAAAGCAAATGGAGGGTGTGGTTATGTGAAAAAGCCTGAATTTCTAATTGAAAAAGGTCCACACAACGAGATTTTTGATCCTAAAAGAACATTGCCAGTGAAGAAGACATTAAAGGTAAAAGTCTACATGGGGACAGGCTGGAGCTCAGATTTCAGCCAAACACACTTCGATTCATACTCACCACCAGACTTCTACGTAAAGGTTGGTATTGTTGGAGTACCTGCTGATAAAGCCAAGAAGAAAACAAAGACAATTTCAAATAACTGGTTTCCCGTGTGGGACGAAGAGTTTGAGTTCCCTTTGACTGTTCCAGAGCTGGCTTTGCTCCGTATAGAAGTTAAAGATGAGGATAAATCTGAAAAGGATGACTTTGGTGGGCAGACATGTTTACCAGTCTCAGAGCTGAAGTCTGGATTCCGTTCAGTTCCTCTGTATGATGAAAAGGGCGAGAAATTTAAATCTGTGAAGCTTTTGATGCGGTTTCAGTTCAAATGA 1737 0.4485 MATRTFNYKTLSCFNRKFTITEPGPPRDVAQAFSAFAAGSPSMSADHLLRFLTDHQGELDLTAQDSDRILRSFLQSRTPADHAAAGLTVDDFFHFLLLDDFNAPLKSQVHHDMNAPLSHYFIYTGHNSYLTGNQLSSDCSDVPIINALQRGVRVIELDLWPNSTKDDIDVLHGRTLTTPISLTQCLKSIKEHAFDKSHYPVIITLEDHLTPDLQAKVAEMATQIFGELLYYPETDSLTEFPTPESLKGRILISTKPPKEYLESKNYDDEVNERESADKGLSSPDLTNEVETDDRDEEELNACDEKSYQQGAPEYKRLITIHAGKSKGDVQDDLKVVGDVRRLSLSEQKLEKASESYGPDIVRFTQKHILRVYPKGTRLNSSNYKPHIGWTYGAQMVAFNMQRHGKSLWFMQGMFKANGGCGYVKKPEFLIEKGPHNEIFDPKRTLPVKKTLKVKVYMGTGWSSDFSQTHFDSYSPPDFYVKVGIVGVPADKAKKKTKTISNNWFPVWDEEFEFPLTVPELALLRIEVKDEDKSEKDDFGGQTCLPVSELKSGFRSVPLYDEKGEKFKSVKLLMRFQFK* 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g0355 578 SMART C2_3c 450 558 IPR000008 -
Dod04g0355 578 SUPERFAMILY EF-hand 5 113 IPR011992 -
Dod04g0355 578 SMART plcy_3 314 430 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Dod04g0355 578 Pfam Phosphatidylinositol-specific phospholipase C, X domain 113 255 IPR000909 -
Dod04g0355 578 SUPERFAMILY PLC-like phosphodiesterases 111 431 IPR017946 GO:0006629|GO:0008081
Dod04g0355 578 Pfam Phosphatidylinositol-specific phospholipase C, Y domain 342 428 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Dod04g0355 578 ProSiteProfiles C2 domain profile. 431 560 IPR000008 -
Dod04g0355 578 MobiDBLite consensus disorder prediction 262 279 - -
Dod04g0355 578 PANTHER PHOSPHOINOSITIDE PHOSPHOLIPASE C 6 6 577 - -
Dod04g0355 578 CDD PI-PLCc_plant 110 417 - -
Dod04g0355 578 PRINTS Phospholipase C signature 544 554 IPR001192 GO:0035556
Dod04g0355 578 PRINTS Phospholipase C signature 368 389 IPR001192 GO:0035556
Dod04g0355 578 PRINTS Phospholipase C signature 142 162 IPR001192 GO:0035556
Dod04g0355 578 PRINTS Phospholipase C signature 116 134 IPR001192 GO:0035556
Dod04g0355 578 PRINTS Phospholipase C signature 239 256 IPR001192 GO:0035556
Dod04g0355 578 PRINTS Phospholipase C signature 389 407 IPR001192 GO:0035556
Dod04g0355 578 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 450 577 IPR035892 -
Dod04g0355 578 MobiDBLite consensus disorder prediction 262 305 - -
Dod04g0355 578 Gene3D Phosphatidylinositol (PI) phosphodiesterase 108 442 IPR017946 GO:0006629|GO:0008081
Dod04g0355 578 PANTHER PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN 6 577 IPR001192 GO:0035556
Dod04g0355 578 Gene3D C2 domain 445 578 IPR035892 -
Dod04g0355 578 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 111 255 - -
Dod04g0355 578 Pfam C2 domain 450 552 IPR000008 -
Dod04g0355 578 CDD C2_PLC_like 448 578 - -
Dod04g0355 578 ProSiteProfiles Phosphatidylinositol-specific phospholipase Y-box domain profile. 343 429 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Dod04g0355 578 SMART plcx_3 111 255 IPR000909 -
Dod04g0355 578 Gene3D - 25 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g0355 Dod-Chr4 4659895 4666292 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g0355 5 578 Acyl Lipid Metabolism Gene Families AT2G40116 62.355 0.0 751
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g0355 K05857 - gmx:100799027 902.123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g1058 08 13394781 13401922 Dod04g0355 04 4659895 4666292 ECH
Dod04g0355 04 4659895 4666292 Dod04g0355 04 4659895 4666292 ECH
Dod04g0355 04 4659895 4666292 Dod08g0694 08 8130568 8137213 PCT