Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g0906 ATGGCAGATCAGCAGAAGATTCATCCTGTCCATGATGTTGAATCACCACCACAACCAACAGCACCATTGGTGCCAAGAAACACGTCAAAATCTGAAAGGGGTGATCCAGACGAATTGCATCATCAACACCCTCCTCCTCCTCCTCCACAATCCAGTCCCCCTGTGATGCAATCAAAGCCACCAAGGAAAAGAAGAAGCTGCTGCTGCAAATTCATGTGCTGGTTTTTCAGCATATTGCTCATTCTTATTGTTGCAATTGGCATCACAGTTGGGATACTATTCCTTGTGTTTAGGCCAAAGATACCAAAATACTCAGTTGATGAAATTGGAGTCACAAACTTTGATCTTTCCACAAATAACAGCTTATCTGTTACTTTCAACTTGACAATCATAGCTAGGAACCCAAACAAGAGAATTGGGATATATTATAGAGGTGGAAGCCACATAAGTGCTTGGTACAATGAAACAAAACTGTGTGAAGGGTCTTTGCCAAAATTCTACCAGGGTCACAAGAACACAACAGTGCTTAACATACCACTTTCAGGGCAAACACAGGATGCAACAGGGTTGCGAGATGCACTTCAGCAGCAACTGGAGCAAAGTGGCAGTGTTCCACTCTTGCTGAGGGCAAAACAGCCTGTGAGGATTAAGCTTGGGAAGTTGAAGCTCTTCAGAATCACATTCAGGGTTAGGTGCAGGATTGTGGTGGATAGCCTTAGTGCTAATAACTCTATTAGGATTCGGAGCAGTAGCTGTAAATTCAGGCTCAAGCTATAA 777 0.435 MADQQKIHPVHDVESPPQPTAPLVPRNTSKSERGDPDELHHQHPPPPPPQSSPPVMQSKPPRKRRSCCCKFMCWFFSILLILIVAIGITVGILFLVFRPKIPKYSVDEIGVTNFDLSTNNSLSVTFNLTIIARNPNKRIGIYYRGGSHISAWYNETKLCEGSLPKFYQGHKNTTVLNIPLSGQTQDATGLRDALQQQLEQSGSVPLLLRAKQPVRIKLGKLKLFRITFRVRCRIVVDSLSANNSIRIRSSSCKFRLKL* 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g0906 258 PANTHER EMBRYOGENESIS ABUNDANT HYDROXYPROLINE-RICH GLYCOPROTEIN, PUTATIVE-RELATED 19 256 - -
Dod08g0906 258 Pfam Late embryogenesis abundant protein 132 233 IPR004864 -
Dod08g0906 258 Gene3D - 95 239 - -
Dod08g0906 258 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 19 256 - -
Dod08g0906 258 MobiDBLite consensus disorder prediction 1 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g0906 Dod-Chr8 11092593 11093665 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g0906 47 258 EF-hand Containing Proteins AT5G21130 30.698 2.25e-32 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g0906 - - gmx:100782663 379.793
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g0906 08 11092593 11093665 Dod08g0906 08 11092593 11093665 ECH
Dod05g0356 05 4515341 4516404 Dod08g0906 08 11092593 11093665 PCT