Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g0356 ATGGCAGATCATCAGAGAGTTTATCCTGCACATGATGTGGAGGCACCACAAAGACCTTCAGCACCTTTGGTGCCTGGAAAAATTGCTAGATCTGATGGAGGTGACCCTATGGATCATCATCATCCACCTCTTCCTCAAAGAACCTTTCCTGTGATGCATTCAAAGCCACCAAAGAAAAGAAGAAGCTGCTGCTGCAGGTTCTTTTGTTGTTTTTTCAGCATATTGTTGATTCTTATCATTGCTATTGCCATCACAGTTGGGGTACTATACCTTGTGTTTAGGCCAAAGCTTCCAAAATACTCAGTTGATGAGTTGGGAATAAACCAATTCAATTCCTCTGGAAGTAACAGCCTTGCTGTTACTTTCAATGTGACAATCACTGCTAGGAACCCAAACAAGAAGATTGGAATATACTATGAGGGTGGCAGCCAAATTAGTGCTTGGTATAGTGACACAAAACTATGTGAAGGGTCTTTGCCAAAATTCTATCAGGGTCATAGAAACACCACTGTGCTTAATCTGCCTTTAACTGGCCAAACACAGGATGCAACTGGCCTAGAAAATTCACTGCAGCAGCAGATCCAAAACACTGGTAATATCCCCCTCAACATTAAGGTCAAACAGCCTGTGAGGGTTAAGCTTGGGAAGTTGAAGCTCTTCAAGGTCAAGTTCAGGGTTAGGTGCAGGATTGTGGTGGATAGCCTTAGTGCTAATAATGATATTAGAATTTCCAGCAGTAGCTGTAAGTTCAAGCTTAGGCTATGA 765 0.4248 MADHQRVYPAHDVEAPQRPSAPLVPGKIARSDGGDPMDHHHPPLPQRTFPVMHSKPPKKRRSCCCRFFCCFFSILLILIIAIAITVGVLYLVFRPKLPKYSVDELGINQFNSSGSNSLAVTFNVTITARNPNKKIGIYYEGGSQISAWYSDTKLCEGSLPKFYQGHRNTTVLNLPLTGQTQDATGLENSLQQQIQNTGNIPLNIKVKQPVRVKLGKLKLFKVKFRVRCRIVVDSLSANNDIRISSSSCKFKLRL* 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g0356 254 Gene3D - 92 236 - -
Dod05g0356 254 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 21 251 - -
Dod05g0356 254 MobiDBLite consensus disorder prediction 1 53 - -
Dod05g0356 254 Pfam Late embryogenesis abundant protein 125 229 IPR004864 -
Dod05g0356 254 PANTHER EMBRYOGENESIS ABUNDANT HYDROXYPROLINE-RICH GLYCOPROTEIN, PUTATIVE-RELATED 21 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g0356 Dod-Chr5 4515341 4516404 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g0356 58 254 EF-hand Containing Proteins AT5G21130 29.442 1.69e-29 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g0356 - - gmx:100789322 317.005
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g0356 05 4515341 4516404 Dod08g0906 08 11092593 11093665 PCT