Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g0848 ATGGCCTCTGTTTCAGTGATGTCACCACTCTGCATGCTTCTCTTCTTCTTCTTCTTTACTTTCTCCTTCTCTGCCAATCTCAACCATAACAACGCCTCCTTCTCACTCTCTTTCCCTCTCACAACAAAAACACTCTCTTCTTCCTCTCTTAACTTGTTCTCAAATTCCAACAACCACCACCAAAAACTTAGGACCCTCTCTTCCTACAACGTTAAGTCCTCCTTCAAATACTCGATGGCACTTGTGGTGTCACTTCCCATAGGTACCCCTCCGCAGGTCCAACAAATGGTCTTGGACACAGGAAGCCAACTCTCTTGGACCCAGTGCTCTCCAAAACAAAGAACAACAACAACAACTCATCCCCCAGCGACGTCGTTTAACCCCTCACTCTCATCCTCTTTCTCCCTCCTCCCTTGCACCCACCCCGTTTGCAAACCCCGCGTTCCCGATTTTACCCTCCCGACAACCTGCGACCAGAACCGCCTCTGCCACTACTCATACTTCTACGCCGACGGAACCTACGCCGAGGGCAATCTCGTCCGAGAAAAACTCGCCCTCTCGAATTCCCAAACTACCCCTCCCCTCATCCTCGGCTGCGCCGCGGCGCAAGCAAGTGACGCCAGGGGCATTTTGGGAATGAATCTTGGCCGACTCTCATTCCCTTCCCAAGCCAAAATCACGAAATTCTCGTACTGCGTCCCAACCCGAACCAAAACCGGAACCGTAACCGGTTCCTTCTACCTTGGAAACAACCCGGATTCCGCACGGTTCCGCTACGTTGAATTGTTGACCTTTGGTCAAAGTCAACGCATGCCGAATCTAGACCCTTTGGCTTACACTCTTCCAATGCAAGGGATCAGGATCGGTAACAAGAGGCTGAACATTGCACCGTCCGTTTTTAAGCCCAACGCTGGCGGGTCGGGTCAAACCATGGTTGACTCCGGATCCGAGTTCACGTTTTTGGTGGACGAGGCTTATGATAGGGTGCGGGAGGAGGTAGTGACATTGGTGGGGTCGAGGATCAAGAAGGGGTACGTGTACGGTGGCGTTGCTGACGTGTGTTTTGATGGGGATGCGATGGAGATCGGACGGCTGATAGGGGACATGGCCTTGGAGTTCGAGAAAGGCGTGGAGATCGTTATCCCGAAGGGGAGGGTGCTTGCCGACGTGGGCCGTGGGGTCCACTGTTTGGGAATAGGGAGGTCTGAGAGATTGGGTGCGGCCAGTAACATTATAGGAAACTTCCACCAGCAGAATCTGTGGGTGGAATTCGATCTGGTTAATCGTAGGGTGGGATTCGGTGAGGCTGATTGTAGCAGATCAGCCAAGTAA 1332 0.5255 MASVSVMSPLCMLLFFFFFTFSFSANLNHNNASFSLSFPLTTKTLSSSSLNLFSNSNNHHQKLRTLSSYNVKSSFKYSMALVVSLPIGTPPQVQQMVLDTGSQLSWTQCSPKQRTTTTTHPPATSFNPSLSSSFSLLPCTHPVCKPRVPDFTLPTTCDQNRLCHYSYFYADGTYAEGNLVREKLALSNSQTTPPLILGCAAAQASDARGILGMNLGRLSFPSQAKITKFSYCVPTRTKTGTVTGSFYLGNNPDSARFRYVELLTFGQSQRMPNLDPLAYTLPMQGIRIGNKRLNIAPSVFKPNAGGSGQTMVDSGSEFTFLVDEAYDRVREEVVTLVGSRIKKGYVYGGVADVCFDGDAMEIGRLIGDMALEFEKGVEIVIPKGRVLADVGRGVHCLGIGRSERLGAASNIIGNFHQQNLWVEFDLVNRRVGFGEADCSRSAK* 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g0848 443 PANTHER ASPARTYL PROTEASE-RELATED 10 441 IPR001461 GO:0004190|GO:0006508
Dod08g0848 443 SUPERFAMILY Acid proteases 82 441 IPR021109 -
Dod08g0848 443 CDD pepsin_A_like_plant 82 438 IPR034161 -
Dod08g0848 443 Gene3D Acid Proteases 249 443 IPR021109 -
Dod08g0848 443 Pfam Xylanase inhibitor C-terminal 278 434 IPR032799 -
Dod08g0848 443 PANTHER EUKARYOTIC ASPARTYL PROTEASE FAMILY PROTEIN 10 441 - -
Dod08g0848 443 Gene3D Acid Proteases 53 248 IPR021109 -
Dod08g0848 443 Pfam Xylanase inhibitor N-terminal 82 249 IPR032861 -
Dod08g0848 443 ProSiteProfiles Peptidase family A1 domain profile. 81 434 IPR033121 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g0848 Dod-Chr8 10207178 10209217 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g0848 83 443 Miscellaneous Gene Families AT1G44130 22.362 4.43e-19 87.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g0848 - - gmx:100790706 633.639
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g0848 08 10207178 10209217 Dod08g0848 08 10207178 10209217 ECH
Dod04g0213 04 2602176 2604467 Dod08g0848 08 10207178 10209217 PCT