Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g0723 ATGTTTTCTTCTTCCTCTTACCCTTCCCCTCCTGTTCTCTCCGACTGGCCGGGTCGGCAGTTCGGTCCCGATCCAATTGTGGCGGCGATGGATGACGGCGCCGGCGGTAACAACAGCGACAAGAGGCTGATAGGTACGAGGTTGTCGGACGTGGTACTCGACATCGTGATGCCGTACATCCACGACCCAAAGGACAGGGACGCTGTCTCTCAAGTCTGCAAGCGTTGGTACGAGCTTGACTCGCTCACGAGGAAGCACGTGACCATCGCGCTCTGCTACACCACCACGCCGGCCAGGCTGCGGCGGCGGTTCCCTCACCTCGAGTCTCTGAAGCTGAAAGGGAAGCCACGCGCCGCCATGTTCAACCTCATACCTGAGGACTGGGGTGGGTTCGTTGCGCCTTGGGTTAGAGAGATCTCTCACTACTTTGATTGCCTCAAGTCACTTCACTTCCGCCGCATGATCGTTAGGGATCCCGATCTTGATCTTCTAGCACGTTCCAGGGGTCACGTGCTTCAGGCACTTAGGCTTGAGAAGTGTTCTGGGTTCTCCACCGATGGTCTCTACTATATTGGTCGGTTTTGCAGGAGTTTGAGAGTCCTGTTTTTGGAGGAGAGCACGGTTGATGAGAAAGATGGCGACTGGCTCCATGAGCTTGCTATGAACAACACAGTTCTCGAGACACTGAATTTTTATCTGACAGATTTTACCCAAGTCAGGATTCAGGATCTTGAGCTCATAGCCAAGAGTTGCCCAAACTTAGTCTCAGTGAAGATCACTGATTGCGAGATCTTGCATCTCGTCAACTTCTTTCGATACGCATCTGCTCTGGAAGAGTTTTGTGGAGGTTCCTACAGCGAGGCACCGGAAAAGTACTCGGCTGTGTTGTTACCAGCAAGGTTAAGCCGGTTGGGTTTGACATATATTGGAAAAGATGAGCTGCCAATGGTGTTCCCTTATGCAGCACTCCTCAAGAAACTGGATCTTCTCTATGCCCTGCTGGACACAGAGGATCACTGCACGTTAATCCAAAGGTGCCCCAATTTGGAAGTCCTAGAGTCAAGGAACGTGATCGGGGACAGAGGGTTAGAAGTACTTGCAAGCAGTTGCAAGAGGCTAAAAAGGCTTAGGATCGAAAGAGGCGACGACGACCAAGGAATGGCGGAGGAGGACGGCGTTGTTTCCCAGAGAGGACTGATCGCGCTGTCACAGGGATGCCCTGAGCTCGAGTACATGGCAGTTTACGTCTCAGACATAACAAACGCGTGCCTGGAACACATCGGCACCCACCTGAAAAACCTCTGCGATTTCCGCCTTGTCCTGCTGGACCGCGAGGAGAAGATCACGGATCTGCCGCTGGACAACGGGGTGAGGGCGCTGCTGAGGGGCTGCGACAAGCTAAGGAGGTTCGCGTTATACCTCAGGCCGGGTGGCCTCACCGACGTGGGGCTCGGTTACATCGGGCAATACAGCCCGAACGTGAGGTGGATGCTCCTTGGCTACGTCGGAGAAACCGACAGGGGGCTCCTGGAATTCTCGAAAGGTTGCCCCAGCCTCCAGAAGCTCGAGATGAGGGGCTGCTCTTTTTTCAGCGAGTATGCTCTGGCTGTTGCTGCGACACGGTTAACTTCGTTGAGGTACTTGTGGGTGCAAGGCTATGGAGCCTCGCCAACGGGGCGTGATCTTTTGGCAATGGCTAGACCCTTTTGGAACATTGAGTTGATCCCTTCAAGACGCGTGCTTGTTAGTAACCACCCTGAAGAGCCTCCTCTGGCTGTTGATCACCCAGCTCAAATTCTTGCATATTACTCTCTTGCTGGCCCAAGAACAGATTTTCCAGATACTGTTTTACCTTTGGATCCTGCAGCATATGTTGATGATGACGACGACGACGATGATGATGATGACGACGGAGACAACGTGTAA 1926 0.5332 MFSSSSYPSPPVLSDWPGRQFGPDPIVAAMDDGAGGNNSDKRLIGTRLSDVVLDIVMPYIHDPKDRDAVSQVCKRWYELDSLTRKHVTIALCYTTTPARLRRRFPHLESLKLKGKPRAAMFNLIPEDWGGFVAPWVREISHYFDCLKSLHFRRMIVRDPDLDLLARSRGHVLQALRLEKCSGFSTDGLYYIGRFCRSLRVLFLEESTVDEKDGDWLHELAMNNTVLETLNFYLTDFTQVRIQDLELIAKSCPNLVSVKITDCEILHLVNFFRYASALEEFCGGSYSEAPEKYSAVLLPARLSRLGLTYIGKDELPMVFPYAALLKKLDLLYALLDTEDHCTLIQRCPNLEVLESRNVIGDRGLEVLASSCKRLKRLRIERGDDDQGMAEEDGVVSQRGLIALSQGCPELEYMAVYVSDITNACLEHIGTHLKNLCDFRLVLLDREEKITDLPLDNGVRALLRGCDKLRRFALYLRPGGLTDVGLGYIGQYSPNVRWMLLGYVGETDRGLLEFSKGCPSLQKLEMRGCSFFSEYALAVAATRLTSLRYLWVQGYGASPTGRDLLAMARPFWNIELIPSRRVLVSNHPEEPPLAVDHPAQILAYYSLAGPRTDFPDTVLPLDPAAYVDDDDDDDDDDDDGDNV* 642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g0723 641 PANTHER F-BOX/TPR REPEAT PROTEIN POF3 44 622 - -
Dod08g0723 641 PANTHER CORONATINE-INSENSITIVE PROTEIN 1 44 622 - -
Dod08g0723 641 SUPERFAMILY RNI-like 123 553 - -
Dod08g0723 641 Pfam F-box 47 86 IPR041567 -
Dod08g0723 641 MobiDBLite consensus disorder prediction 617 641 - -
Dod08g0723 641 Pfam Transport inhibitor response 1 protein domain 105 151 IPR041101 -
Dod08g0723 641 Gene3D Ribonuclease Inhibitor 85 623 IPR032675 -
Dod08g0723 641 MobiDBLite consensus disorder prediction 623 641 - -
Dod08g0723 641 SMART LRR_CC_2 346 369 IPR006553 -
Dod08g0723 641 SMART LRR_CC_2 251 270 IPR006553 -
Dod08g0723 641 SMART LRR_CC_2 516 541 IPR006553 -
Dod08g0723 641 SMART LRR_CC_2 169 194 IPR006553 -
Dod08g0723 641 SMART LRR_CC_2 464 490 IPR006553 -
Dod08g0723 641 Gene3D - 35 84 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g0723 Dod-Chr8 8689310 8694577 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g0723 K13463 - gmx:100793081 1046.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g0723 08 8689310 8694577 Dod08g0723 08 8689310 8694577 ECH
Dod04g0328 04 4246691 4250277 Dod08g0723 08 8689310 8694577 PCT