Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g0328 ATGGAGGATCGGAGCGTGAGGAAGACGCGCCTTGTTGACGCGGTGATGGACTGTGTGATACAGTACATCGACGACCCAAAAGACCGCGACGCCGTTTCGCAGGTTTGTCGGCGGTGGTACGAGCTCGATTCGCTGACGCGGAAGCACGTGACCATCGCGCTCTGCTACACCACCACGCCGGGCCGGCTCAGGCGGCGGTTCCCTCACCTGGAGTCGTTGAAGCTGAAGGGGAAGCCGAGGGCGGCGATGTTCAACTTGATTCCCGAGGACTGGGGAGGTTACGTGACGCCATGGGTGGGGGAGATCTCGCAGCACTTTGGGTGCCTCAGGAGCCTCCATTTCCGCCGCATGATTGTTAGGGACTCCGATCTTGAGATCCTTGCTAGGTCACGTGGTCAGGTGCTTCAGGCACTCAAGCTTGATAAGTGTTCTGGGTTTTCCACCGATGGGCTTTTATTTGTTGGCAGGTTTTGCAGGAGTTTAAGAGTCTTGTTTTTGGAGGAAAGCACAATTGTTGAGAAAGACGGCAAATGGCTACATGAACTCGCGCTAAATAATACAGTTCTTGAGGCGCTGAATTTTTACTTGACAGATTTTGCTGAGGTCAAAATTCCGGACCTTGAACTTATAGCCCAAAATTGCCCGAAGTTAGTCTCTGTGAAAGTTACTGATTGTGAAATATTGGATCTCGTGAACTTCTTTCGCTATGCCTCTGCTCTAGAAGAATTCTGTGGTGGTGCCTACAGTGAGGAAGCAGATAAGTACAATAGTGTAGCATTACCAGCAAAATTATGCCGGTTGGGACTGACTAATATCGGAAAGAATGAGTTGCCGATTGTGTTTGTGTATGCAGCAGTACTGAAAAAATTGGATCTCATGTATGCAATGCTGGATACAGAGGATCATTGTATGTTAATCCAAAGGTGCCCCAATTTGGAAGTTCTTGAGTCAAGGAATGTGATTGGAGATAGAGGATTGGAAGTTCTTGCTCGCTGTTGTAGGAGGTTAAAAAGGCTTAGGATTGAACGAGGTGATGATGATCAAGGAATGGAGGATGAAGAAGGTGTTGTTTCCCATAGAGGATTGATTGCTTTGTCACAGGGATGTCCAGAACTTGAATATTTGGCTGTTTATGTATCTGACATTACAAATGCGTGTCTGGAACATATTGGTAGTCACTTGAGAAACCTTTGTGATTTTCGCCTTGTCTTGCTTGATCATGAGACGGAAATAATTGATTTGCCACTTGACCGCGGAGTAAAGGCTTTGCTGATGGGTTGTGACAAGCTTAGAAGATTTGCTCTGTATCTTCGAGCCGGGGGCTTGACTGATGAGGGTCTTGGTTACATTGGGCAATACAGCCAAAATGTGAGATGGATGCTGCTTGGTTACGTGGGGCAGTCTGATGCAGGGCTTTTGGAGTTCTCCAAGGGCTGTCCTAACCTTCAGAAACTTGAAATGAGAGGCTGTTACTTTTTCAGTGAGCGTGCGCTAGCTGTTGCTGCCATGCGACTGGCTTCTCTTAGGTACTTGTGGGTGCAAGGGTATGGTGCATCGTCATCCGGACGCGATCTTTTCGCTATGGCTCGCCCCTTCTGGAACATTGAGTTGATTCCATCTAGACATGTGGCTGTTACTAATAATCCAGAAGAGCCTGTAATTGTTGAGCATCCTGCTCACATTCTGGCATACTACTCTCTTGCTGGGCAAAGGTCGGATTTTCCAGATACTGTTGTACCTTTGGAATGTACCACGTGTGTATAA 1764 0.4773 MEDRSVRKTRLVDAVMDCVIQYIDDPKDRDAVSQVCRRWYELDSLTRKHVTIALCYTTTPGRLRRRFPHLESLKLKGKPRAAMFNLIPEDWGGYVTPWVGEISQHFGCLRSLHFRRMIVRDSDLEILARSRGQVLQALKLDKCSGFSTDGLLFVGRFCRSLRVLFLEESTIVEKDGKWLHELALNNTVLEALNFYLTDFAEVKIPDLELIAQNCPKLVSVKVTDCEILDLVNFFRYASALEEFCGGAYSEEADKYNSVALPAKLCRLGLTNIGKNELPIVFVYAAVLKKLDLMYAMLDTEDHCMLIQRCPNLEVLESRNVIGDRGLEVLARCCRRLKRLRIERGDDDQGMEDEEGVVSHRGLIALSQGCPELEYLAVYVSDITNACLEHIGSHLRNLCDFRLVLLDHETEIIDLPLDRGVKALLMGCDKLRRFALYLRAGGLTDEGLGYIGQYSQNVRWMLLGYVGQSDAGLLEFSKGCPNLQKLEMRGCYFFSERALAVAAMRLASLRYLWVQGYGASSSGRDLFAMARPFWNIELIPSRHVAVTNNPEEPVIVEHPAHILAYYSLAGQRSDFPDTVVPLECTTCV* 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g0328 587 Pfam F-box 9 49 IPR041567 -
Dod04g0328 587 Gene3D - 1 47 - -
Dod04g0328 587 Gene3D Ribonuclease Inhibitor 48 585 IPR032675 -
Dod04g0328 587 PANTHER CORONATINE-INSENSITIVE PROTEIN 1 9 583 - -
Dod04g0328 587 PANTHER F-BOX/TPR REPEAT PROTEIN POF3 9 583 - -
Dod04g0328 587 SUPERFAMILY RNI-like 86 516 - -
Dod04g0328 587 Pfam Transport inhibitor response 1 protein domain 68 114 IPR041101 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g0328 Dod-Chr4 4246691 4250277 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g0328 K13463 - gmx:100779171 1016.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g0328 04 4246691 4250277 Dod08g0723 08 8689310 8694577 PCT