Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g0669 ATGACAAACACGCCGCAACAACAATCTCCATTTCCTCAAAACGACGACGTCCTCGACGACGACCATCTCCAACAGGTAGAAAAAGAAGAAAACGACGATGACGATGACGATGACGATGACGATGACGAAGACGAAGACGAATACGACGCCGTATCACGACAACCGAATCGCGGAGCCCCACAATCCAAGCTCCGGGAGCAGCGTTTCAAGGTCGAAACGCTGGCCCGGAGGCTGTCGTCTGAGCTGGTCCCAATCCGAGTCCACGACGTCGTCATAAACGGCAACACGAAGACCAAGGATTGGGTCATCGAAGCAGAGCTCAAAGGCATCGAGAGCGCCACCACAATGCAGGACCTCATGCGGGCCTGCGAAGCCTCCATCGCCAGGCTTCAGAGGCTCGAAATATTCGATTCCTGCAAGGTCAGGCTAGAGCCCGGGCCTCGTGAGCTTCCTCACACCGCAAACGTCGTCGTCGAGGTCGTCGAGACGCAAAGCACCGTTTCCGGCGAATGCGGCGTTTATACTAAACCCTCGACTAGTTCTTGGACCACTGAGGGTGCTATAAAGTATAAGAACTTGTTGGGTTATGCTGACATATGGGATGCTTCTGTGGCGTATGGTGGCAGCCAAGCGACAGAGGTGAGTGTGGGAGTTTATGCGCCCCGAATTAAAGGATTGTTGAGCCCTATTGTGGCGCGGATATCCTTGCTTTCCCAAGATTGGCAGGAGTTTTCTTCGTACAAAGAGCGGTTGCTGGGTATGTCTCTTGGGTTGATATCGACAAAGCACCATGACTTGGCATATACTCTTGGATGGCGTACGTTGACAGATCCATCACAAACAGCGTCCAGGTCTATAAGGAGGCAGCTTGGGCATAGTTTACTTTCATCTTTGAAGTATACATTTAAATTGGACAGGAGAAATTCATCTATTAGGCCTACAAGAGGATATGCCTTTTTATCTACGACCCATATTGGTGGCCTGACACCAGATCACCGGGCTTTGCGGTTTCTGCGTCAGGAGTTTGATGTTCGAATTGCTGTCCCCTTGGGGTTTTATAATACAGCAGTGAACCTTGGGATATCTGCTGGCACTGTTTTTCCATGGGGGCATGGGTTCATGAACAAGCCATCTCCACTTCCAGAAAGGTTTTATTTGGGTGGCGACTTCTCTCCAGTTTGCACCCTAGGAGGACCAACAACCTTATGGGGATTTAAAACCAGGGGTTTAGGTCCTACTGAACCACGGAGGCAAATTAGAGATAGAACTAATGATAACAATGGTGATTTTCCTGGATGGGACTTCATTGGAGGAGATCTTGCTGTTACTGCATTTGCTGACCTCTCTTTCGATCTTCCAATTAAATGGCTGAGAGAACATGGAATCCATGGGCATGTTTTTGCTGGTTCTGGGAATACTGCTAAATTGACTCAGAATGAATATAAGCACTTCTCTCCTCGAAAGTTCCTAGAATCCTTTCGAATGTCAGTGGGATGTGGAATTGTTATTCCTACAAGACTATTCCGTCTAGAGGGTAACTACTTCTACATACTAAAGAAGGATGAGCATGATCGTGGGAAGACCGGATTTAGGTTCAGCTTCTCAGCCCCTTCCTAG 1617 0.4873 MTNTPQQQSPFPQNDDVLDDDHLQQVEKEENDDDDDDDDDDDEDEDEYDAVSRQPNRGAPQSKLREQRFKVETLARRLSSELVPIRVHDVVINGNTKTKDWVIEAELKGIESATTMQDLMRACEASIARLQRLEIFDSCKVRLEPGPRELPHTANVVVEVVETQSTVSGECGVYTKPSTSSWTTEGAIKYKNLLGYADIWDASVAYGGSQATEVSVGVYAPRIKGLLSPIVARISLLSQDWQEFSSYKERLLGMSLGLISTKHHDLAYTLGWRTLTDPSQTASRSIRRQLGHSLLSSLKYTFKLDRRNSSIRPTRGYAFLSTTHIGGLTPDHRALRFLRQEFDVRIAVPLGFYNTAVNLGISAGTVFPWGHGFMNKPSPLPERFYLGGDFSPVCTLGGPTTLWGFKTRGLGPTEPRRQIRDRTNDNNGDFPGWDFIGGDLAVTAFADLSFDLPIKWLREHGIHGHVFAGSGNTAKLTQNEYKHFSPRKFLESFRMSVGCGIVIPTRLFRLEGNYFYILKKDEHDRGKTGFRFSFSAPS* 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g0669 538 Gene3D membrane protein fhac: a member of the omp85/tpsb transporter family 177 536 - -
Dod08g0669 538 Gene3D membrane protein fhac 84 163 - -
Dod08g0669 538 PANTHER OUTER MEMBRANE OMP85 FAMILY PROTEIN 24 536 - -
Dod08g0669 538 PANTHER SORTING AND ASSEMBLY MACHINERY SAMM50 PROTEIN FAMILY MEMBER 24 536 IPR039910 -
Dod08g0669 538 MobiDBLite consensus disorder prediction 26 49 - -
Dod08g0669 538 MobiDBLite consensus disorder prediction 1 65 - -
Dod08g0669 538 Pfam Omp85 superfamily domain 192 535 IPR000184 GO:0019867
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g0669 Dod-Chr8 7809240 7814399 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g0669 K07277 - gmx:100802876 871.692
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g0669 08 7809240 7814399 Dod08g0669 08 7809240 7814399 ECH
Dod04g0380 04 4990838 4995951 Dod08g0669 08 7809240 7814399 PCT