Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g0380 ATGGAAAACTCCGACGAGCCAAACCCTAACAACAACCACACTCCCCACTCCCCCAATGCCGACGCCGAAGAACACGAAAACCACTACACCGAAGAAGAAGAAGAAGAAGACGAAGACGACGACGACGGCGATGAAGACGAAAACGGCGTCGTGTCGCAGCAATCCCCATTGTCGCGGCTGCGCGAGCAGCGTTTCAAGATGGAGACCCTGTCGCGGCGGCTGTCGTCGGAGCTGGTCCCAATCAGAGTCCACGACGTGCTGATTCGCGGCAACGCGAAAACGAAGGACTGGGTGATCGAGGCCGAGCTGAAAGGGATCGAGGACGCAGCTACCATGCAAGACCTGATTCGAGCCTCCGAGGTCGCACTCGCCAGGCTCCAGGGGCTCGGAATCTTCGATTCCACCAACCTCCACCTCGAGCCTGGACCGCCGGAGCTCCCTCACACCGCCAACGTCGTTGTTGACGTTGTCGAGGCCGCCAACAAAGTCAGTGGTGAATTCGGAGTTTACACGAAACCCTCGACTAGTTCGTGGACTACTGAAGGTACTCTTAAGTACAAAAACTTGTTAGGTTATGGTGATCTATGGGATGCTTCTGTGGCCTATGGTGCCAACCAAGCAACAGAGGTGAGCGTAGGGGTCTATGCCCCTCAACTTAAAGGACTGTTAACTCCTCTTGTAGCAAGACTGTCCTTGCTTTCCCAAGATTGGCAAGAGTTTTCTTCATACAAAGAGCAATTGTTGGGCATGTCTCTTGGTTTAATCTCAACACAGCACCATGACTTAGTGTACACTCTTGGATGGCGTACCTTAACAGATCCATCACAAATGTCATCCAGGTCTATAAGGAGGCAACTTGGCCATGGTTTACTGTCATCTCTGAAGTATACATTTAAAATTGACAGGAGAAATTCGCCAATTAGGCCCACAAAAGGATATGCTTTTCTTTCTACCACTCGCTTTGGTGGCCTTACCCCAGATCATCGAAGCTTGCGGTTTATTCGTCAGGAGTTTGATGTTCGTTATGCTGTCCCCTTTGGGTTTTATAATACAGCACTGAACCTTGGGATTTCTGCTGGTGCTGTTTTTCCATGGGGCCATGATTTCTTGAACAAGCCATCTCCCCTTCCTGAAAGGTTTTATATCGGTGGTGATTTCTCTCCTGTTTGCACCCTGGGAGGGCCAGTAACATTGTGGGGATTTAAAACTAGGGGTTTAGGTCCTACTGAACCACGAAGGCAGTGCAGAGATGGAATTAACGATGACAATGATGATTCATCTAGATGGGACTTTGTCGGAGGAGATCTTGCTGTTAGTGCTTTTGCAGACCTCTCGTTTGATCTTCCAATTAGATGGTTGAGAGAACATGGAATCCACGGCCATGTTTTTGCTGGTGCTGGGAATACTGCTAAATTAACTCAGGATGAATATAAGCAGTTCTCTCCTCGAAAGTTCTTAGAATCCTTTCGAACATCGGTGGGCTGTGGATTGGTTATTCCTACTAGACTTTTCCGCCTAGAGGGTAACTTCTACCACATTCTCCGGCAGGATGAGCATGATAGTGGGAAAACTGGATTTAGGTTCAGCTTCTCATCTCCTTCATAG 1605 0.4903 MENSDEPNPNNNHTPHSPNADAEEHENHYTEEEEEEDEDDDDGDEDENGVVSQQSPLSRLREQRFKMETLSRRLSSELVPIRVHDVLIRGNAKTKDWVIEAELKGIEDAATMQDLIRASEVALARLQGLGIFDSTNLHLEPGPPELPHTANVVVDVVEAANKVSGEFGVYTKPSTSSWTTEGTLKYKNLLGYGDLWDASVAYGANQATEVSVGVYAPQLKGLLTPLVARLSLLSQDWQEFSSYKEQLLGMSLGLISTQHHDLVYTLGWRTLTDPSQMSSRSIRRQLGHGLLSSLKYTFKIDRRNSPIRPTKGYAFLSTTRFGGLTPDHRSLRFIRQEFDVRYAVPFGFYNTALNLGISAGAVFPWGHDFLNKPSPLPERFYIGGDFSPVCTLGGPVTLWGFKTRGLGPTEPRRQCRDGINDDNDDSSRWDFVGGDLAVSAFADLSFDLPIRWLREHGIHGHVFAGAGNTAKLTQDEYKQFSPRKFLESFRTSVGCGLVIPTRLFRLEGNFYHILRQDEHDSGKTGFRFSFSSPS* 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g0380 534 PANTHER SORTING AND ASSEMBLY MACHINERY SAMM50 PROTEIN FAMILY MEMBER 3 532 IPR039910 -
Dod04g0380 534 MobiDBLite consensus disorder prediction 1 63 - -
Dod04g0380 534 PANTHER OUTER MEMBRANE OMP85 FAMILY PROTEIN 3 532 - -
Dod04g0380 534 Pfam Omp85 superfamily domain 188 531 IPR000184 GO:0019867
Dod04g0380 534 Gene3D membrane protein fhac: a member of the omp85/tpsb transporter family 164 533 - -
Dod04g0380 534 MobiDBLite consensus disorder prediction 1 17 - -
Dod04g0380 534 MobiDBLite consensus disorder prediction 27 48 - -
Dod04g0380 534 Gene3D membrane protein fhac 80 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g0380 Dod-Chr4 4990838 4995951 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g0380 K07277 - gmx:100785408 882.863
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g0380 04 4990838 4995951 Dod04g0380 04 4990838 4995951 ECH
Dod04g0380 04 4990838 4995951 Dod08g0669 08 7809240 7814399 PCT