Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g0649 ATGGAAGCTCTCAAGACCATCTTGGCAATGTTTATTGTCTTCGTTTCAGCATTGTCTTTAGCAAATGCCAAAGTTCTCCAGCACGAGTTTGTTGTACAAGCAACACCAGTGAAGAGGCTGTGCAACACTCACAGTACCATCACCGTGAATGGCCAATTTCCTGGCCCAACGTTGGAAGTCAACAGTGGAGACACCTTGGTCGTCAAAGTCATTAACAAAGCTCAATACAATGTGACCATTCACTGGCACGGTATTAGGCAAATGAGAACAGGATGGGCTGATGGACCGGAATTCGTGACTCAATGTCCAATTCGACCTGGAGAGAGTTACACCTATAGGTTTACTATTCAAGGACAAGAAGGCACACTTTGGTGGCATGCTCATAGCTCATGGGTAAGAGCCACTGTCTATGGAGCTTTAATAATTCACCCCAAGGAAGGAGATTCCTACCCTTTCGCAAAGCCAAAGCGCGAGACAGCCATTCTTCTAGGGGAATGGTGGGACGCAAACCCAATGGATGTTGTGAGGCAGGCCACGCTAACAGGAGCATCGCCGAATATATCTGATGCATACACCATCAATGGTCAACCTGGCGATCTGTACAAGTGCTCTAGCCAAGGAACCACCATCGTCCCAACAGATTTCGGGGAAACCAACCTCCTCCGCATCATCAACGCCGCACTCAACCAACCCCTCTTCTTCACCATCGCCAACCACAAGCTCACCGTCGTCGGCGCCGACGCCTCCTACCTCAAGCCCTTCACCACCACCGTCATCATGCTCGGCCCCGGCCAGACCACCGACGTCCTCGTCACCGCCGACCAACCCCCTTCCCGCTACTACATCGCCGCACGCGCCTACCAGTCCGCTCAAAACGCACCGTTCGACAACACCACCACCACCGCCATCCTCGAATACAAGTCAGCACCGTGTCCCGCAAAAGGAACTCTCGCGCCAAAGCCAGCCATGCCTCCTCTCCCAGCCTACAACGACACCAACACCGTAACTTCCTTCAGCAGCAGCCTCAAAAGCCCTCGAAAAGTTGAAGTCCCCACTGAAGTAGACGAAAGCCTCTTCTTCACCATTGGCTTAGGTCTCAACAACTGTCCAAAGAACTTCAACAAGAACCAGTGTCAAGGACCTAACGGGACAAGATTCACTGCGAGCATGAACAATGTTTCGTTTGTGTTGCCCAGTAGTATTTCCATTCTTCAGGCTCATCATCTTGGTGTTCCTGGTGTGTTCACCGCTGATTTTCCCGTTAAGCCTCCGGTGCAGTTTGATTACACTGGTAACGTGAGTCGTTCTTTGTGGCAACCTGTTGCGGGGACTAAGGTGGCGAAGTTGAAGTATGGGTCCAGGGTGCAGATTGTGTTGCAGGATACGAGTATTGTTACTCCTGAGAATCATCCTATTCATCTTCATGGGTATGATTTCTATATTGTGGCTGAAGGGTTTGGGAACTTTGATCCCAAGAGAGATTCGTCAAAGTTCAACCTTGTTGATCCGCCTATGAGGAACACTGCGGCTGTGCCTGTGAATGGATGGGCAGTTATCAGATTCGTTGCTGACAACCCAGGTAATAAGTTATGA 1593 0.5041 MEALKTILAMFIVFVSALSLANAKVLQHEFVVQATPVKRLCNTHSTITVNGQFPGPTLEVNSGDTLVVKVINKAQYNVTIHWHGIRQMRTGWADGPEFVTQCPIRPGESYTYRFTIQGQEGTLWWHAHSSWVRATVYGALIIHPKEGDSYPFAKPKRETAILLGEWWDANPMDVVRQATLTGASPNISDAYTINGQPGDLYKCSSQGTTIVPTDFGETNLLRIINAALNQPLFFTIANHKLTVVGADASYLKPFTTTVIMLGPGQTTDVLVTADQPPSRYYIAARAYQSAQNAPFDNTTTTAILEYKSAPCPAKGTLAPKPAMPPLPAYNDTNTVTSFSSSLKSPRKVEVPTEVDESLFFTIGLGLNNCPKNFNKNQCQGPNGTRFTASMNNVSFVLPSSISILQAHHLGVPGVFTADFPVKPPVQFDYTGNVSRSLWQPVAGTKVAKLKYGSRVQIVLQDTSIVTPENHPIHLHGYDFYIVAEGFGNFDPKRDSSKFNLVDPPMRNTAAVPVNGWAVIRFVADNPGNKL* 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g0649 530 CDD CuRO_1_LCC_plant 28 144 IPR034288 GO:0005507
Dod08g0649 530 Gene3D - 368 529 IPR008972 -
Dod08g0649 530 SUPERFAMILY Cupredoxins 350 528 IPR008972 -
Dod08g0649 530 Pfam Multicopper oxidase 32 146 IPR011707 GO:0005507
Dod08g0649 530 PANTHER LACCASE 6 528 - -
Dod08g0649 530 Pfam Multicopper oxidase 419 528 IPR011706 GO:0005507|GO:0016491
Dod08g0649 530 TIGRFAM laccase: laccase 23 527 IPR017761 GO:0046274|GO:0048046|GO:0052716
Dod08g0649 530 Gene3D - 158 347 IPR008972 -
Dod08g0649 530 SUPERFAMILY Cupredoxins 22 172 IPR008972 -
Dod08g0649 530 CDD CuRO_2_LCC_plant 161 306 IPR034285 -
Dod08g0649 530 PANTHER MULTI-COPPER OXIDASE 6 528 IPR045087 -
Dod08g0649 530 Pfam Multicopper oxidase 158 308 IPR001117 -
Dod08g0649 530 Gene3D - 28 157 IPR008972 -
Dod08g0649 530 SUPERFAMILY Cupredoxins 152 344 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g0649 Dod-Chr8 7645832 7650118 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g0649 K05909 - gmx:100796956 974.541
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g0400 04 5242745 5246992 Dod08g0649 08 7645832 7650118 PCT