Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g0309 ATGAAACTCAAACTCTTTCAGATTCTAACAGTTGTTGTTCTGTTACTGTCCCCAACTGCCACTGCCACTGTCACCACCCCACAAGAGTATGTTCGCCCTTTGCCTCGAAAAACCTTAGACATCCCATGGGGTTCAGCTTCTAAGGCACGCTCACAACCCCAGCAGGTACACATTTCTTTGGCAGGAGACAAGCACATGAGAGTTACCTGGATAACTGATTATAAACATTCATCTTCATTTGTGGAATATGGGAAATCACCTGGGAGATATGAAACAGTAGCTGAAGGAGATTTCACCTCTTACAGTTATCTGCTATATAGCTCAGGAAGGATACACCACACTGTAATAGGGCCTTTGGAAGCCAATACTGTGTACTATTACCGATGTGGTGGACAAGGTCCTGAGTTCCAGCTTAAAACCCCTCCATCGCAGCTTCCAATTACTTTTGCTGTAGCAGGGGATCTGGGTCAAACCGGTTGGACTCAATCGACATTAGATCACATTGATCAATGTAAATATGATGTCTACCTGCTTCCAGGAGACCTTTCATATGCTGATTATATGCAGCATCTGTGGGACTCATTTGGTGAGCTAGTGGAGCCACTTGCTAGTACAAGGCCATGGATGGTAACGGAAGGGAACCATGAAGAGGAGAATATACCATTGTTGAAGGAAGGTTTTGTATCCTATAATTCCAGGTGGAAAATGCCATTTGAGGAAAGTGGATCGCCATCAAATCTCTATTATTCTTTTGAAGTTGCAGGTGTTCACATTATCATGCTTGGCTCCTATGCTGATTATGATGAGTACTCAGAACAATACGGATGGCTAAAGGGAGATCTATCAAAGGTGGATAGGAAAAGGACACCTTGGCTGGTTGTGTTGTTTCATGTGCCATGGTATAATAGTAATAAGGCTCATCAAGGTGCAGGAGATGAGATGATGGCAGCTATGGAGCCATTGCTTTATGCTGCTAGTGTTGATTTGGTCATTGCTGGCCATGTTCATGCTTATGAACGCTCGAAACGCGTGTATAATGGAGGATTGAATCCTTGTGGTGCTGTACATATAACTATTGGTGATGGAGGGAATAGAGAAGGCTTAGCTCATAAGTATATAAATCCACAGCCAGATTGGTCAGAATTCCGTGAAGCCAGCTTTGGTCATGGTGAGCTGATGATGGTTAACTCAACTCATGCCTACTGGAGTTGGCACAGGAATGATGATGATGAGCCAGTAAAAGCTGATGATTTTTGGATAACATCTTTGGTCAGCTCAGGATGTGTTGATCAGAAAAACCATGATTTCCGGAGCATGCTTATGACACCCTAA 1332 0.4354 MKLKLFQILTVVVLLLSPTATATVTTPQEYVRPLPRKTLDIPWGSASKARSQPQQVHISLAGDKHMRVTWITDYKHSSSFVEYGKSPGRYETVAEGDFTSYSYLLYSSGRIHHTVIGPLEANTVYYYRCGGQGPEFQLKTPPSQLPITFAVAGDLGQTGWTQSTLDHIDQCKYDVYLLPGDLSYADYMQHLWDSFGELVEPLASTRPWMVTEGNHEEENIPLLKEGFVSYNSRWKMPFEESGSPSNLYYSFEVAGVHIIMLGSYADYDEYSEQYGWLKGDLSKVDRKRTPWLVVLFHVPWYNSNKAHQGAGDEMMAAMEPLLYAASVDLVIAGHVHAYERSKRVYNGGLNPCGAVHITIGDGGNREGLAHKYINPQPDWSEFREASFGHGELMMVNSTHAYWSWHRNDDDEPVKADDFWITSLVSSGCVDQKNHDFRSMLMTP* 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g0309 443 Gene3D - 52 143 - -
Dod08g0309 443 CDD MPP_PAPs 146 422 IPR041792 -
Dod08g0309 443 SUPERFAMILY Metallo-dependent phosphatases 146 413 IPR029052 -
Dod08g0309 443 Pfam Calcineurin-like phosphoesterase 148 338 IPR004843 GO:0016787
Dod08g0309 443 Gene3D - 144 431 IPR029052 -
Dod08g0309 443 Pfam Purple acid Phosphatase, N-terminal domain 53 133 IPR015914 GO:0003993|GO:0046872
Dod08g0309 443 Pfam Iron/zinc purple acid phosphatase-like protein C 354 410 IPR025733 -
Dod08g0309 443 PANTHER ACID PHOSPHATASE RELATED 8 433 IPR039331 GO:0003993
Dod08g0309 443 SUPERFAMILY Purple acid phosphatase, N-terminal domain 40 142 IPR008963 GO:0003993|GO:0046872
Dod08g0309 443 PANTHER PURPLE ACID PHOSPHATASE 8 433 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g0309 Dod-Chr8 3269857 3273044 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g0309 49 438 Miscellaneous Gene Families AT2G03450 26.667 7.97e-29 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g0309 K22390 - gmx:100787977 774.622
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g0309 08 3269857 3273044 Dod08g0309 08 3269857 3273044 ECH
Dod05g0877 05 15653054 15656688 Dod08g0309 08 3269857 3273044 PCT