Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g0877 ATGGAACTCAAACTGATTTTAACGGTTTTGTTGATAGTGTCAGCAACCGTGACAGCCGATTATGTTCGACCTCAGCCTCGAAAGGCCTTACACCTCCCATGGGATTCGAAGTCCTCCTCCTTGCCTCAGCAGGTACACATTTCTTTGGCAGGAGACAAACACATGAGAATCACCTGGATTACTGATGATAACTCTGCACCTTCAACTGTAGAATATGGAAAATTAACTGGGAGATATGACTCTGTAGCTGAAGGAGAGTCCACCTCTTATAGTTATCTATTCTATAGCTCAGGGAAGATACACCATGCTGTAATAGGGCCTTTAGAAGATAATTCTGTGTACTTTTACCAATGTGGTGGAAAGGGTTCCGAGTTCCAGCTCAAAACTCCTCCAGCTCGATTTCCGGTTACTTTTGCTGTGGCTGGGGATCTCGGTCAAACCGGTTGGACCAAATCGACATTAAACCACATTGACCAATGTAAATATGATGTTCACCTGCTTCCTGGAGACCTTTCCTATGCGGATTATATCCAACGTCGCTGGGACACTTTTGGTAGGCTAGTGCAGCCGCTTGCTAGTGCAAGACCGTGGATGGTAACACAAGGAAACCATGAAGAGGAGAACATACCGTTGTTAAAGGATGGATTTGTGTCTTATAATTCCAGATGGAAAATGCCATTTGTGGAAAGTGGATCAAGTTCAAATCTCTATTATTCTTTCGAAGTTACAGGTGTTCACATTATCATGCTTGGCTCCTATGCAGATTATGATGAGTACTCAGAACAATATACATGGCTGAAGGCAGATCTGTCAAAGGTGGACAGGAAAAGGACACCTTGGCTGCTTGTGTTATTTCACGTGCCATGGTATAATAGTAACGACGCTCATCAAGGGGAAGGGGGTGATATGATGGCAGCAATGGAGCCATTACTTTATGCTTCTAGCGTCGATTTAGTTCTTGCTGGTCACGTGCATGCTTATGAACGCACCAACCGCGTGTATAATGGAAGATTGGATCCTTGTGGCGCTGTTCATATAACTATTGGTGATGGAGGAAATCGAGAAGGCTTAGCTGCTAAGTATATAAACCCACAGCCAAAATGGTCAGCATTCCGCGAAGCCAGTTTTGGTCATGGTGAGCTCAAGATCGTAAACTCGACACATGCCTTCTGGAGTTGGCACAGGAATGATGATGATGAGCCTGTAAAATCAGATGATTTCTGGATAACCTCTTCAGTTAGCTCAGGATGTGTTGATCAGAAGAGAAATGAATTCAGGAATACCCTGATGACACCCTAA 1299 0.4411 MELKLILTVLLIVSATVTADYVRPQPRKALHLPWDSKSSSLPQQVHISLAGDKHMRITWITDDNSAPSTVEYGKLTGRYDSVAEGESTSYSYLFYSSGKIHHAVIGPLEDNSVYFYQCGGKGSEFQLKTPPARFPVTFAVAGDLGQTGWTKSTLNHIDQCKYDVHLLPGDLSYADYIQRRWDTFGRLVQPLASARPWMVTQGNHEEENIPLLKDGFVSYNSRWKMPFVESGSSSNLYYSFEVTGVHIIMLGSYADYDEYSEQYTWLKADLSKVDRKRTPWLLVLFHVPWYNSNDAHQGEGGDMMAAMEPLLYASSVDLVLAGHVHAYERTNRVYNGRLDPCGAVHITIGDGGNREGLAAKYINPQPKWSAFREASFGHGELKIVNSTHAFWSWHRNDDDEPVKSDDFWITSSVSSGCVDQKRNEFRNTLMTP* 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g0877 432 PANTHER ACID PHOSPHATASE RELATED 4 422 IPR039331 GO:0003993
Dod05g0877 432 Pfam Iron/zinc purple acid phosphatase-like protein C 343 399 IPR025733 -
Dod05g0877 432 Pfam Calcineurin-like phosphoesterase 137 327 IPR004843 GO:0016787
Dod05g0877 432 Gene3D - 133 420 IPR029052 -
Dod05g0877 432 Pfam Purple acid Phosphatase, N-terminal domain 42 123 IPR015914 GO:0003993|GO:0046872
Dod05g0877 432 PANTHER PURPLE ACID PHOSPHATASE 4 422 - -
Dod05g0877 432 CDD MPP_PAPs 135 411 IPR041792 -
Dod05g0877 432 Gene3D - 41 132 - -
Dod05g0877 432 SUPERFAMILY Purple acid phosphatase, N-terminal domain 32 131 IPR008963 GO:0003993|GO:0046872
Dod05g0877 432 SUPERFAMILY Metallo-dependent phosphatases 135 402 IPR029052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g0877 Dod-Chr5 15653054 15656688 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g0877 42 423 Miscellaneous Gene Families AT2G03450 27.074 9.54e-31 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g0877 K22390 - gmx:100782338 782.711
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g0877 05 15653054 15656688 Dod05g0877 05 15653054 15656688 ECH
Dod05g0877 05 15653054 15656688 Dod08g0309 08 3269857 3273044 PCT