Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g0277 ATGGGTTATAGAGTTTTCATGGGGTGTTTGTTTCTCTTCATATTCATCTTTGGTACTATCTCGGAGGCTCAAATGGTTCCAGCTGTTTATGTTTTTGGAGACTCACTTGTAGATGTTGGCAACAACAATTACTTGAGGCTTTCAGTTGCAAGGGCAGACCACCCTTACTATGGTATAGACTTTCCAACTCATAAACCAAATGGGAGATTCAGCAATGGCAAGAATGTTGCAGATTTCATTTCTGAGAAATTGGGATTGCCAACTTCGCCACCTTACCTCTCCCTAATCTCGAAATCAAGTGCCAACAAAAACAATGCATCCTTTTTGGATGGTGTTAGCTTTGCCTCCTCAGGTGCTGGAATATTTAACGGCACAGATGAACGTTTTAGACAATCAATACCTTTAACAAGGCAAGTGACCTACTACTCACTTATGTATGAGGAAATGAAGCAAGAAGTAGGAGCAGATGCTCTGCAGAAGCGTCTCTCAAAATCAATTTTTGCAGTGGTGATTGGCAGCAATGATCTGTTTGGCTACTTACAGTCGTCTAATCTTCGTAGGAAAATCACCCCACAGCAGTATTTGGATTCCGTGGTTTTCTCACTAAAAGTGCAACTACAGCGATTATACGATCAAGGTGCTCGTAAATTTGAGATTGCTGGCATTGGGGCACTTGGATGTGCCCCTGCATTCAGGGTGAACAACAAAACGGAATGCCTTGCAGATGCTAATTACTGGTCAGTTAAATGTAATGAAGGCCTTCAATCCATGCTCAAGGAATGGCAATCAGAGAATAAAGACATAACCTACTCCTTCTTTGATACTTATGCTGCCGTCACCGACCTCATTCTGAACCCAGCTTCGTATGGATTCAGAGAGGTGAAAGCTGCTTGTTGTGGACTGGGCGAGCTGAATGCCAAGGGTCTTTGCCTGCCGCTGTCGAACCTTTGTTCCAACAGACAAGACCACATCTTCTGGGATTTATTCCATCCTACGGAGGCAGCTGATCGTATTTTTGCTGATAGAATGTTCGATGGCCCTTCAAATTACACCTATCCGATTAACATGAGACAGCTCGTAGCTGCCTGA 1089 0.4353 MGYRVFMGCLFLFIFIFGTISEAQMVPAVYVFGDSLVDVGNNNYLRLSVARADHPYYGIDFPTHKPNGRFSNGKNVADFISEKLGLPTSPPYLSLISKSSANKNNASFLDGVSFASSGAGIFNGTDERFRQSIPLTRQVTYYSLMYEEMKQEVGADALQKRLSKSIFAVVIGSNDLFGYLQSSNLRRKITPQQYLDSVVFSLKVQLQRLYDQGARKFEIAGIGALGCAPAFRVNNKTECLADANYWSVKCNEGLQSMLKEWQSENKDITYSFFDTYAAVTDLILNPASYGFREVKAACCGLGELNAKGLCLPLSNLCSNRQDHIFWDLFHPTEAADRIFADRMFDGPSNYTYPINMRQLVAA* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g0277 362 Pfam GDSL-like Lipase/Acylhydrolase 29 342 IPR001087 GO:0016788
Dod08g0277 362 Gene3D SGNH hydrolase 16 348 IPR036514 -
Dod08g0277 362 PANTHER GDSL LIPASE/ACYLHYDROLASE FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_4G14700) 10 360 - -
Dod08g0277 362 SUPERFAMILY SGNH hydrolase 29 344 - -
Dod08g0277 362 CDD SGNH_plant_lipase_like 27 347 IPR035669 -
Dod08g0277 362 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 10 360 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g0277 Dod-Chr8 2963548 2967898 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g0277 26 362 Acyl Lipid Metabolism Gene Families AT4G10950 31.778 2.03e-59 195
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g0277 - - gmx:100777307 536.184
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g0277 08 2963548 2967898 Dod08g0277 08 2963548 2967898 ECH
Dod05g0913 05 17079415 17084661 Dod08g0277 08 2963548 2967898 PCT