Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g0913 ATGGGCAACGGTGCTATGCCGGGCAGTTCTCTGCTCTTTTTCTCTTTCTTCATCTTCAACTTAGGATTCTTAGAGGCTCAAAATGCTCCAGCCATTTATGTGTTTGGAGACTCTCTTGTTGATGTTGGCAACAACAATTACTTGAGTTTTTCCATTGAAAGGGCAATTCTTCCTTACTATGGCATTGATTTTCCAACAAAGAAACCCAATGGGAGGTTCAGCAATGGCAAGAATGCTGCAGATTTTATTGCTGAGAAATTAGGCCTCCCAACTTCACCACCTTACCTCTCCCTAGTGCATAAGTTCAACCAAAAGAAGAACAACGCGTCTTTCTTGAATGGTGTTAGCTTTGCCTCTGGAGGGGCTGGAATATTTGATGGAACTAATGAAAGCCTCAGACAAAATATACCTTTGAGAAAGCAAGTGGACTACTACTCACTAGCGCATGAGCAATTGACACAGCAATTAGGAGCAACGGCACTTCAGAACCATCTCTCAAAATCCATCTTTGCTCTTGTGATTGGAAGCAATGATCTTTTCGGTTACTTTAACTCAAAAGATCTTCAGAAGAAAAGCACCCCACAACAATATGTGGACTCCATGGCTTCGTCATTAAAAGTGCAGTTACAGAGATTGTACGACTATGGTGCAAGGAAATTTGAAATTGCTGGTGTTGGTGCGATTGGATGCTGCCCTCAATACAGGCTCAAGAACAATACTGAATGTGTTTCAGAAGCCAATTCCTGGTCGGTTAAATATAATGAACGCCTTCGATCCATGTTGAATGAATGGCAATCGGAGAACAAGGACATAAGCTACTCCTACTTTGACGCTTATACTGCCATGCATGACCTCATTGAGAATCCAACTTCATATGGATTTATGGAAGTGAAAGTTGCTTGCTGTGGTCTTGGCAAGCTGAATGCTGAAATTCCTTGCCTCCCAATTTCGAGCGTTTGTTCCAACAGACAAGATCATATCTTCTGGGATCCATTCCATCCAACAGAGGCTGCAGCTCGCATCTTTGTGGATAGACTCTTTGACGGATCTTCAAAATATGCATATCCTATTAATATGAGACAGTTATTAGCTGCTTGA 1098 0.4199 MGNGAMPGSSLLFFSFFIFNLGFLEAQNAPAIYVFGDSLVDVGNNNYLSFSIERAILPYYGIDFPTKKPNGRFSNGKNAADFIAEKLGLPTSPPYLSLVHKFNQKKNNASFLNGVSFASGGAGIFDGTNESLRQNIPLRKQVDYYSLAHEQLTQQLGATALQNHLSKSIFALVIGSNDLFGYFNSKDLQKKSTPQQYVDSMASSLKVQLQRLYDYGARKFEIAGVGAIGCCPQYRLKNNTECVSEANSWSVKYNERLRSMLNEWQSENKDISYSYFDAYTAMHDLIENPTSYGFMEVKVACCGLGKLNAEIPCLPISSVCSNRQDHIFWDPFHPTEAAARIFVDRLFDGSSKYAYPINMRQLLAA* 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g0913 365 Gene3D SGNH hydrolase 22 351 IPR036514 -
Dod05g0913 365 Pfam GDSL-like Lipase/Acylhydrolase 32 344 IPR001087 GO:0016788
Dod05g0913 365 PANTHER GDSL LIPASE/ACYLHYDROLASE FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_4G14700) 8 363 - -
Dod05g0913 365 SUPERFAMILY SGNH hydrolase 30 347 - -
Dod05g0913 365 CDD SGNH_plant_lipase_like 30 350 IPR035669 -
Dod05g0913 365 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 8 363 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g0913 Dod-Chr5 17079415 17084661 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g0913 29 363 Acyl Lipid Metabolism Gene Families AT4G10950 34.604 5.44e-67 215
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g0913 - - gmx:100790145 563.148
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g0913 05 17079415 17084661 Dod05g0913 05 17079415 17084661 ECH
Dod05g0913 05 17079415 17084661 Dod08g0277 08 2963548 2967898 PCT