Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g0275 ATGGCAATTCCATTTTATGATGAAAATCTGTACATCCTGAATATGAAGAATGATCTTGAGGCCAAGGCTGCAGAACCCTCGGTTGAAGGCTTAACTGCTGCTACTAAAGATCCCATTCCCCCATCATCTGTGCTGAAGCAATTGGCTATAGCTGTTCAGGCTGGAAGAAAAGCAAAATCATTGAAAGAGTTAATAGCTTCATCAGGAGGTTCTTCACCAGCCAAAGAGAGGGCAGCCTTAAGTCTCTCTGCAGTGAAGGCTTTACTGCTGCGTGAAAAGGAGGACAAGCTTACATCTGAGTTTAGTAGTGATGAGAAAGTTGTGAATTTGATTAATTCTCTGTTTGATCCAGATATTCACAGAGGGAGATTTCCTCAGAAGGAAGATAAACACCAATCCAGAAGAAACTGCGATAACATCTTTGCCAAGAGACATCCATGGTGCTCCTCCTGA 453 0.426 MAIPFYDENLYILNMKNDLEAKAAEPSVEGLTAATKDPIPPSSVLKQLAIAVQAGRKAKSLKELIASSGGSSPAKERAALSLSAVKALLLREKEDKLTSEFSSDEKVVNLINSLFDPDIHRGRFPQKEDKHQSRRNCDNIFAKRHPWCSS* 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g0275 150 PANTHER RAB3 GTPASE-ACTIVATING PROTEIN CATALYTIC SUBUNIT 2 118 - -
Dod08g0275 150 PANTHER RAB3 GTPASE-ACTIVATING PROTEIN CATALYTIC SUBUNIT 2 118 IPR045700 GO:0005096|GO:0043547
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g0275 Dod-Chr8 2942431 2943466 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g0275 K18270 - gmx:100818643 192.971
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g0275 08 2942431 2943466 Dod08g0275 08 2942431 2943466 ECH
Dod05g0928 05 17658867 17668642 Dod08g0275 08 2942431 2943466 PCT