Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g0928 ATGGAGGCTCATTCCTTCGTGTCGAAAGCGAGAACCGCGATTCACTCAGCGGCTGCAAAAGCGGAGCGGGTTCTCATGGACTTCAAATCCGATCGAGATTCTGAAAAACAAGCGCGCGACGATTTGGGGAGGCAGCAGCAGCAGGGACCTGAATCTGCTCGCAATGAGAATGAGTCAAAGCTTCTCAGTGAATTGAAGCAGATAAAGTGGAGACCTCCGCACATAGGAATAAAGCCGGATTGGCAAGATAGAATCAACAACATTCGGAAAGGGAGAAAAGAAGTTGAAGATACAGACAAAGTTGGAGAAACAAACATGGCTGCTGTTCCATTTTATGATGAAAATTTGTACATCCTGAATATGAAAAATGATCTTGATGCCAAGGCATCAGAAGCAATTCCCTCGGTTGAAGGCTTAACTGTTGCAGCTGAAGACCCCATTCCTCCATCGTTTGTCCTGAAGCAATTGGCTGTAGCTGTTGAGGCTGGAAGGAAAGCAAACTCAATGAAAGATTTTGTAGCTTCATCAGGAGGTTCTTCACCTGCCAGAGAGAGGGCAGGCTTAAGTCTCTCTGCAGTGAAGGCTTTAGTGATGCGTGAAAAGGAAGACAAACTTACCTCTGAGTTTAGTAGCAATGAGAAAGTTTTGCATTTGATTAATTCTTTGCTTGATCCAGAGGGAGAGTTCCTTAGAAGGAAGATCAACTCCAATCCAGAAGAAACTGCCATAGCATCTTTGTCAAGAGATATTCATGGTGCTCCTCCTGAAAGCCTAGTTGTTAAGCTAGCTGAAGTCATTGGAAACTTCAAAACACTCCGAAAAATGGCTCTTTTTTGGTGCAGGCTTGTTTCTGAACTGAGAAAACATTGGTCAGAAGAAAAATATTTACCTGGAGTCCCTCCAGATGATATTCCAGATCTGAACTCATGTCTTCTGTATCAACAATTTCAAGTAATTAATTGTTGCATCTCTCGGAAAAAGCGCCATATTATTGCCTCCGAATCCCTAGGCTCTATGATGAGGGAAGCCAATTCAAATATAGCAGAATCTGCCAACTATGCTGACAGAACACCTGCAAGCCCTTTATTATATGCTAGATTAAGTACTGGGGAACTTGTTCTTCGACTTGGTGCTCATTGCCCATCTGGAGATCTGACAATGCTAGAAACTGGCGAGCCTGTTTATTCTCCTGTGATGCAGGAGGGACCCTTGCTCACAGAAGATCTGATCAGGGAAACTGAGGAGTTTGTGCTGCGGACAGGAAGTGTTGGTGCTGGGTGCTCTCAACTTCTCTCTGATATGCAGGCTTTCAAGGCTGCAAATCCTGGTTGTATTTTGGAAGATTTTGTAAGATGGCACTCTCCTCCTGATTGGACAGAAAGTGAGGCAAGTGCTGAGGACAGTGAGTTTTTTGATGATTGTGAATCATTGTCTACCAGAGGCCAGCTAAGTCGGCGAATGCAAAAAGAAGGTAATTTGTGGCGTGAATTGTGGGAAACATCTAAACCAATACCAGCTGTTAAACAGGCACCTCTCTTTGATGAGGATTTGGCAGTGGAGGGCATTCTTGATGCATTTGAGGATTTGCAGCCTTCGGAGCTTTTTGGACAGCTGTTCGTTTCTTTACTTGGTTTAGGACTCGCAATAGCGGAACCTATGCTGACTGGTAACACTGACTTTTTGAAGATGTTCAACGACTGCAAGGAGTATGTAGTTGTCACTTGTCAAAGTAACAAATGGCGTGAGAAACTTGATGAACTTGTCCAGGTCTATGAAACAGTGGAGACAATGTTAGTGAATCCAGAGGAAGCACTAAGAATGATGCAGCAGACAGAAGAATCGACTCCGAATACTGGTGAACCAAGGCGCCGGTTTAAGAGGCTTAGCCATATCTTTGGCGGCAAAGATAAACTATCAATATCGACTAAGCTTGCCATCACAAAAGATCAGATAAACGATGATGAAAAGCCTATTCGACAAGCTTTTTCAAGTTTCTTTGACAGCAGGTCATCTTTATTTTCAAAGAAGCCTCCTAAGCCTGGAAGCCTGTCCCCTGCCGAGAAACCTCCCTCTCCGGAAAGTGACTGGACAATTGTTTAG 2100 0.4405 MEAHSFVSKARTAIHSAAAKAERVLMDFKSDRDSEKQARDDLGRQQQQGPESARNENESKLLSELKQIKWRPPHIGIKPDWQDRINNIRKGRKEVEDTDKVGETNMAAVPFYDENLYILNMKNDLDAKASEAIPSVEGLTVAAEDPIPPSFVLKQLAVAVEAGRKANSMKDFVASSGGSSPARERAGLSLSAVKALVMREKEDKLTSEFSSNEKVLHLINSLLDPEGEFLRRKINSNPEETAIASLSRDIHGAPPESLVVKLAEVIGNFKTLRKMALFWCRLVSELRKHWSEEKYLPGVPPDDIPDLNSCLLYQQFQVINCCISRKKRHIIASESLGSMMREANSNIAESANYADRTPASPLLYARLSTGELVLRLGAHCPSGDLTMLETGEPVYSPVMQEGPLLTEDLIRETEEFVLRTGSVGAGCSQLLSDMQAFKAANPGCILEDFVRWHSPPDWTESEASAEDSEFFDDCESLSTRGQLSRRMQKEGNLWRELWETSKPIPAVKQAPLFDEDLAVEGILDAFEDLQPSELFGQLFVSLLGLGLAIAEPMLTGNTDFLKMFNDCKEYVVVTCQSNKWREKLDELVQVYETVETMLVNPEEALRMMQQTEESTPNTGEPRRRFKRLSHIFGGKDKLSISTKLAITKDQINDDEKPIRQAFSSFFDSRSSLFSKKPPKPGSLSPAEKPPSPESDWTIV* 700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g0928 699 MobiDBLite consensus disorder prediction 29 60 - -
Dod05g0928 699 PANTHER RAB3 GTPASE-ACTIVATING PROTEIN CATALYTIC SUBUNIT 3 699 - -
Dod05g0928 699 PANTHER RAB3 GTPASE-ACTIVATING PROTEIN CATALYTIC SUBUNIT 3 699 IPR045700 GO:0005096|GO:0043547
Dod05g0928 699 Pfam Rab3 GTPase-activating protein catalytic subunit 375 527 IPR026147 -
Dod05g0928 699 MobiDBLite consensus disorder prediction 670 699 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g0928 Dod-Chr5 17658867 17668642 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g0928 K18270 - gmx:100800515 1031.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g0928 05 17658867 17668642 Dod05g0928 05 17658867 17668642 ECH
Dod05g0928 05 17658867 17668642 Dod08g0275 08 2942431 2943466 PCT