Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g0238 ATGGCACCGATGGGAGATAATGTTGTTGTGTCCAATATGGAACTGGAGAGGTTGCTAAGCATGAAAGGAGGCAAAGGAGAGGCCAGCTATGCCAACAATTCCCAAGCACAGGCTATACATGCTAAGTCCATGATTCACCTCCTGAAAGAAACCCTGGACAGAGTTCAGCTTCCTCATGCTTCTGAAATCCCATTTGTGGTAGTGGACTTGGGGTGTTCATGTGGAAGCAACACCATCAACGTGGTGGATGTGATCATCAAGCACATCATCAAGCGCTATGAGGCCTTAGGCAATGACTTCAACACCCTCTTCCAGCTCCTTCCTCCGCTGCTTGCAAACTGTGGCGGCGTTACCATGGAAGAGTGCCTCGCCGCCAACAACCACCGCTCCTACTTCGCCGCCGGAGTCCCCGGTTCCTTCTACCGGAGGCTTTTTCCGGCTAGGTCTGTTGATGTTTTCCACTCAGCCTTTTCTTTGCATTGGTTATCTCAGGTCCCAGAATCTGTGATGGACAAGAGGTCAAGTGCATACAACAAGGGCAGGGTTTTTATCAATGGTGCTGGTGAGAGCACAGCAAATGCCTACAAGAAACAATTCCAAACAGACTTAGCAGGCTTTTTGAGAGCAAGGTCAGTGGAGATGAAAAGAGAGGGGTCCATGTTCCTAGTTTGCTTAGGGAGAACCTCAGTGGACCCCACAGACCAAGGTGGGGCAGGCCTTCTTTTTGGTACCCATTTTCAGGATGCTTGGGATGATCTTGTCCAAGAGGAATTGATTAGCAGTGAAAAACGAGACAGTTTTAACATTCCAGTGTATGCACCAAGCCTGCAAGACTTCAAGGAGGTGGTTGAAGCTGATGGCTCATTTGCCATAAACAAGCTTGAGGTGTTCAAAGGAGGGAGCCCCCTTGTTGTGAACCAGCCCGATGATGCCAGTGAAGTAGGCAGGGCTTTAGCCAACAGCTGCAGGAGTGTGTCTGGTGTCCTTGTTGATGCACACATTGGTGACAAGATCAGTGAGGAGCTTTTCCTTAGAGTGCAACTTCGAGCCGCAAGCCATGCCAAAGAGCTACTAGAGCAACTACAGTTCTTTCACATTGTTGCATCGCTTTCTTTTGCACAATGA 1125 0.4916 MAPMGDNVVVSNMELERLLSMKGGKGEASYANNSQAQAIHAKSMIHLLKETLDRVQLPHASEIPFVVVDLGCSCGSNTINVVDVIIKHIIKRYEALGNDFNTLFQLLPPLLANCGGVTMEECLAANNHRSYFAAGVPGSFYRRLFPARSVDVFHSAFSLHWLSQVPESVMDKRSSAYNKGRVFINGAGESTANAYKKQFQTDLAGFLRARSVEMKREGSMFLVCLGRTSVDPTDQGGAGLLFGTHFQDAWDDLVQEELISSEKRDSFNIPVYAPSLQDFKEVVEADGSFAINKLEVFKGGSPLVVNQPDDASEVGRALANSCRSVSGVLVDAHIGDKISEELFLRVQLRAASHAKELLEQLQFFHIVASLSFAQ* 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g0238 374 Gene3D Vaccinia Virus protein VP39 33 300 IPR029063 -
Dod08g0238 374 PANTHER S-ADENOSYL-L-METHIONINE:CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN 11 372 IPR005299 GO:0008168
Dod08g0238 374 Gene3D - 19 355 IPR042086 -
Dod08g0238 374 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 13 371 IPR029063 -
Dod08g0238 374 Pfam SAM dependent carboxyl methyltransferase 55 370 IPR005299 GO:0008168
Dod08g0238 374 PANTHER INDOLE-3-ACETATE O-METHYLTRANSFERASE 1 11 372 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g0238 Dod-Chr8 2660611 2665026 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g0238 K18848 - gmx:100807953 658.677
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g0238 08 2660611 2665026 Dod08g0238 08 2660611 2665026 ECH
Dod05g0768 05 12057019 12063260 Dod08g0238 08 2660611 2665026 PCT