Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g0768 ATGGCCCCCATGGGAGACAATATTGTAGTGTCCAATGTGGAGCTAGAGAGGTTGCTTAGCATGAAAGGAGGCAAAGGAGAGGCCAGCTATGCTAACAATTCCCAAGCACAGGCCATACATGCCAAGTCCATGCTTCACCTTCTCAAGGAAACCCTAGACAGGGTTCAGCTTCATGCCCCTGACATCCCATTTGTGGTAGTGGACTTGGGGTGTTCATGTGGGAGCAACACCATCAACGTGGTGGATGTGATCATCAAGCACATCATCAAGCGCTACGAGGCATTAGGATTAGACCAGCCTGAGTTCTCAGCTTTCTTCTCTGACCTCCCTAGCAATGACTTCAACACCCTCTTCCAGCTCCTTCCTCCGATGGCCAACTACGGAGTCAGCATGGAAGAGTGCCTTGCCGCCAACAACCACCGATCCTACTTCGCCGCCGGAGTCCCAGGCTCTTTCTACCGGAGGCTTTTTCCGGCGAGGTCCATTGATGTTTTCCACTCAGCCTTTTCCTTGCACTGGTTATCTCAGGTACCTGAATCTGTCCTGGACAAGAGGTCAAGTGCATACAACAAAGGCAGGGTGTTTATCCATGGTGCTGGTGAGATCACAGCAAATGCTTACAAGAAACAATTCCAAACAGACTTGGCAGGCTTCCTGAGCTCAAGGTCTGTGGAGATGAAGAGAGGGGGGTCCATGTTCTTGGTTTGCTTAGGCAGAACTTCAGTGGACCCCACAGACCAAAGTGGGGCTGGTCTCCTCTTTGGGACCCACTTTCAGGATGCCTGGGATGATCTTGTCCAAGAGGGACTAATTAGCAGTGAGAAACGAGACAATTTCAACATCCCAGTTTATGCACCAAGCCTGCAAGACTTCAAGGAGGTGGTTGAAGCTGTTGGCTCATTTTGCATTGACAAGCTTGAGGTTTTCAAAGGAGGGAGCCCACTTGTGGTGAGCCAGCCAGATGATGCAAGTGAAGTTGGAAGAGCTCTATCCAACAGCTGCAGGAGTGTGTCTGGGGTCCTTGTTGATGCCCACATTGGCGACAAGCTCAGTGAGGAGCTCTTTCTAAGAGTGGAGCGCCGAGCCACAAGCCATGGCAAAGAGTTATTGGAGCAACTACAGTTCTTTCACATTGTGGCATCCCTTTCTTTTGCTCGATGA 1161 0.5065 MAPMGDNIVVSNVELERLLSMKGGKGEASYANNSQAQAIHAKSMLHLLKETLDRVQLHAPDIPFVVVDLGCSCGSNTINVVDVIIKHIIKRYEALGLDQPEFSAFFSDLPSNDFNTLFQLLPPMANYGVSMEECLAANNHRSYFAAGVPGSFYRRLFPARSIDVFHSAFSLHWLSQVPESVLDKRSSAYNKGRVFIHGAGEITANAYKKQFQTDLAGFLSSRSVEMKRGGSMFLVCLGRTSVDPTDQSGAGLLFGTHFQDAWDDLVQEGLISSEKRDNFNIPVYAPSLQDFKEVVEAVGSFCIDKLEVFKGGSPLVVSQPDDASEVGRALSNSCRSVSGVLVDAHIGDKLSEELFLRVERRATSHGKELLEQLQFFHIVASLSFAR* 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g0768 386 Gene3D Vaccinia Virus protein VP39 33 312 IPR029063 -
Dod05g0768 386 PANTHER S-ADENOSYL-L-METHIONINE:CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN 11 384 IPR005299 GO:0008168
Dod05g0768 386 Gene3D - 19 365 IPR042086 -
Dod05g0768 386 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 14 383 IPR029063 -
Dod05g0768 386 Pfam SAM dependent carboxyl methyltransferase 62 382 IPR005299 GO:0008168
Dod05g0768 386 PANTHER INDOLE-3-ACETATE O-METHYLTRANSFERASE 1 11 384 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g0768 Dod-Chr5 12057019 12063260 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g0768 K18848 - gmx:100801476 708.368
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g0768 05 12057019 12063260 Dod05g0768 05 12057019 12063260 ECH
Dod05g0768 05 12057019 12063260 Dod08g0238 08 2660611 2665026 PCT