Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g0236 ATGGCACCCTCAATTTTTTTCCTTCTTTTATTACCCCTTCTGTTCAATGCAATCAGTGGTGGTGATCTCCAACAGCATGAAGAGGGTTTCATCTCTGTGGTGATATCTGATAAGGGTCTTGACTTTGCCAAGGATTTGCTGATAGAACAAGCTACTGCCTCCATTGTTATGTCTCAGCTGCCACAGATTGAGAAGTCTGTCCAAGTACCGCTTGTTGGGAAGGCTAGAGTGGTTCTCTCTGAGATCACAATCAAAGATATCCAAATAAATTCTTCATCCGTTGAGACAGGAGAGACAGGAATTTCTGTGGTTGTTTCAGGTGCCACTGCCAATTTGAACATGAATTGGAGGTATACTTGCAGCAGTTGGTTAGTCCCAATTGGAATTTCTGATAGTGGAACAGCCACCGTGAAGGTTAAAGATCTGCAAGTGGGGCTTACTGTAAATTTGAGGAACCAAGAAGGAACTCTTAAGTTAATTCTCTTAGATTATGGATGTCATGTTGGAGATGTATCTATAAAGATGAACGGTGGAGCAGCATGGCTTTACCAAGTGCTAGTAAATGCTTTTGATGGGAATATAGCATCTGCAGTTGAAGAGGCCGTTTCTCAGAAAATAAGAGATGGGATAGCAACGCTTGACAACTTATTGCAATCTATTCCAAAGACAATCTCAATTGATGATACTGCTGCTCTAAATGTTTCATTCGTGGATGATCCTTTGCTCAGCAATTCTTCTATTGAAGTTGAAATTAGTGGTTTGTTCATAGGGAGAAATGAAGGTTTAGTATCTCAAAGTCATCACAAAGGATCAGAGGTTTCTGCTTCCTGTGGTGGCATGCCAAAGATGATAAAGATTTCACTTCATGAAGATGTTTTCAAATCCGCTTCCTTAGTTTACTTCGATGCAGATAGTATGCAATGGATTCTTGATGAGCTACCTGATCAGGCTCTTTTGAACACTGCTGAATGGAGATTCATAATTCCTCAATTATACAAGCAGTATCCAAATGATGACATGAACCTTAATATCTCTGTAAATTCTCAACCAGTCATACACGTTACCGACCAAGATGTTAAGGCTACCATTAATTTGGATATAATAATTGATGTTCTGGAAGCTGGTGAAGTCATACCTGTTGCATGCATCACAGTGGTATGTTTGAATGAAGTTTCAGAAGAGAGAGCTAAAATACTAAAGTGGATGGTTAAAATTCTTGTTTGA 1224 0.3946 MAPSIFFLLLLPLLFNAISGGDLQQHEEGFISVVISDKGLDFAKDLLIEQATASIVMSQLPQIEKSVQVPLVGKARVVLSEITIKDIQINSSSVETGETGISVVVSGATANLNMNWRYTCSSWLVPIGISDSGTATVKVKDLQVGLTVNLRNQEGTLKLILLDYGCHVGDVSIKMNGGAAWLYQVLVNAFDGNIASAVEEAVSQKIRDGIATLDNLLQSIPKTISIDDTAALNVSFVDDPLLSNSSIEVEISGLFIGRNEGLVSQSHHKGSEVSASCGGMPKMIKISLHEDVFKSASLVYFDADSMQWILDELPDQALLNTAEWRFIIPQLYKQYPNDDMNLNISVNSQPVIHVTDQDVKATINLDIIIDVLEAGEVIPVACITVVCLNEVSEERAKILKWMVKILV* 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g0236 407 PANTHER LBP/BPI/CETP FAMILY, CARBOXY-TERMINAL DOMAIN PROTEIN 1 386 - -
Dod08g0236 407 PANTHER OS06G0309200 PROTEIN 1 386 IPR045897 -
Dod08g0236 407 SMART bpi1_3 35 260 IPR017942 GO:0008289
Dod08g0236 407 Pfam LBP / BPI / CETP family, N-terminal domain 39 212 IPR017942 GO:0008289
Dod08g0236 407 Pfam LBP / BPI / CETP family, C-terminal domain 262 369 IPR001124 GO:0008289
Dod08g0236 407 SUPERFAMILY Bactericidal permeability-increasing protein, BPI 246 386 IPR017943 GO:0008289
Dod08g0236 407 Gene3D - 215 395 - -
Dod08g0236 407 SUPERFAMILY Bactericidal permeability-increasing protein, BPI 33 244 IPR017943 GO:0008289
Dod08g0236 407 Gene3D - 38 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g0236 Dod-Chr8 2639637 2643660 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g0236 K05399 - gmx:100804747 568.926
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g0236 08 2639637 2643660 Dod08g0236 08 2639637 2643660 ECH
Dod05g0767 05 12022962 12028319 Dod08g0236 08 2639637 2643660 PCT