Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g0217 ATGGACTCCCCACAATCTGTTGTGTCACCATTCAAGAGCTCTATCTTAGGTAATGGTGAGAAGCATCAGCATGATGCTTTCAATCAAGGCTCTGGTCCCTTGTCTAAGGACTTTGAAGTCAATGGAAAGGAAGCTGTTGCGTCTAATCTGGAGGACTTCATCGGTGTTGTTGATGTTTACATACATCAGGCAAGGGACATTCATAACATCTGCATATACCACAAGCAAGATGTTTATGCTAAGATTTGCTTGACTAGTGATCCTGAGAATGCTGTCTCCACCAAGATCATCAATGGAGGAGGGAGGAACCCTGTGTTCAATGAGAATCTTAGGCTAAGTGTTAGGACTGTTGAGACTGCTGTCAAATGTGAGATTTGGATGCTGAGTCGGGTGAAGAATTATCTTGAAGACCAGTTGCTTGGTTTTGCTTTGGTGCCTTTGTCTGAAGTGCTGGTGAATAAGGATGACAAACTGGAGAAAGAGTTCTCTCTTTCTTCAACTGATCTTTTCCATTCCCCAGCAGGTTTTGTTCAATTGTCACTTGCTTACACTGGTGCCTCACCTGATGTTATGGCAATATCTGCGATGCCTAAAGAGTTGGCCTCGATTGTCACTGAGAAGGACTCAGAAACATCTGAGTCATTCAGAGATTTAGACAAAATTGAGTTCCCTGATCCAAAAGTGGTGAATGAAGACCACTTGATGGTTTCGGAATACTTTGGCATTCCATGTGAGGAGAGCCAGTGCTCAGATAGCTTGGCCGCCACTGATGCTGAAGACCATAGTTCCGAAGCAGGTAAGCAACTTGTGGAAAGCTTCTCAGCGTGCAGTGTTGGGTCTGTGCAGCCTGCTAAGGTTGATTCTCCACCCAGCAGTTTGTCAACAAATGGGGTTTCATCTCATTCGGCGGCTGCCAGTTCTGAATCATCTGATGCTGCTGTTGCTTCTAAGCCTCCCAGTCAGGAACAAGTTACAGGCACCAAAGAGAAAAGTGTGGACGGCAAAGATGGCGATAGTGATTCCTCAAATGGGGTACCACATGAGCCATTTGCTAAGCCTGTTGCGACTGTGAACATTGAGCCTGAACCAAAGCTGGTGCAGCAGGATATAGTAGACATGTACATGAAAAGCATGCAGCAATTTACTGAGTCATTAGCAAAGATGAAGCTACCTATGGACCTTGAAAGTGGACCAGCTAGTTCAGGCAACTCCAGCACTGAACAGAAGAAACTACAGGCATCAAAGAGCGGTAACTCCCGTGTGTTTTATGGTAGCAGAGCTTTCTTCTGA 1290 0.4535 MDSPQSVVSPFKSSILGNGEKHQHDAFNQGSGPLSKDFEVNGKEAVASNLEDFIGVVDVYIHQARDIHNICIYHKQDVYAKICLTSDPENAVSTKIINGGGRNPVFNENLRLSVRTVETAVKCEIWMLSRVKNYLEDQLLGFALVPLSEVLVNKDDKLEKEFSLSSTDLFHSPAGFVQLSLAYTGASPDVMAISAMPKELASIVTEKDSETSESFRDLDKIEFPDPKVVNEDHLMVSEYFGIPCEESQCSDSLAATDAEDHSSEAGKQLVESFSACSVGSVQPAKVDSPPSSLSTNGVSSHSAAASSESSDAAVASKPPSQEQVTGTKEKSVDGKDGDSDSSNGVPHEPFAKPVATVNIEPEPKLVQQDIVDMYMKSMQQFTESLAKMKLPMDLESGPASSGNSSTEQKKLQASKSGNSRVFYGSRAFF* 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g0217 429 Gene3D C2 domain 51 213 IPR035892 -
Dod08g0217 429 Pfam C2 domain 56 162 IPR000008 -
Dod08g0217 429 SMART C2_3c 56 159 IPR000008 -
Dod08g0217 429 MobiDBLite consensus disorder prediction 397 417 - -
Dod08g0217 429 PANTHER CALCIUM-DEPENDENT LIPID-BINDING (CALB DOMAIN) FAMILY PROTEIN 1 429 - -
Dod08g0217 429 PANTHER EXPRESSED PROTEIN 1 429 - -
Dod08g0217 429 MobiDBLite consensus disorder prediction 1 33 - -
Dod08g0217 429 MobiDBLite consensus disorder prediction 392 417 - -
Dod08g0217 429 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 55 187 IPR035892 -
Dod08g0217 429 MobiDBLite consensus disorder prediction 281 362 - -
Dod08g0217 429 MobiDBLite consensus disorder prediction 328 342 - -
Dod08g0217 429 ProSiteProfiles C2 domain profile. 42 162 IPR000008 -
Dod08g0217 429 MobiDBLite consensus disorder prediction 281 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g0217 Dod-Chr8 2517475 2519092 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g0217 - - gmx:100781587 663.299
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g0217 08 2517475 2519092 Dod08g0217 08 2517475 2519092 ECH
Dod05g0715 05 10958614 10961148 Dod08g0217 08 2517475 2519092 PCT