Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g0715 ATGGACTCACCACAGTCTGTTGTGTCACCATTCAAGAGCTCAGTGTTAGGTGAGGGTGAGAAGTACAAGCCTGATGTATTTGAGGTCAACGGAAAGGAATCTGTCATCATATCAAATGAGGATGAGTTCATTGGCATGCTTGATGTTTACATACATCAGGCTAGGGACATTCACAACATCTGCATATACCACAAGCAAGATGTTTATGCCAAGGTTTGCCTCACTAGTAACCCTGATGACACTGTTTCCACCAAGACCATCAATGGTGGGGGGAGGAACCCTGTCTTCAATGAGAACCTTAGGGTCAATGTTAGGACTGTTGATTCTTCACTCAAATGTGAGATATGGATGCTGAGCAGGGTGAAGAATTATCTTGAAGACCAGTTGCTTGGTTTTGCTTTGGTTCCTTTGTCTGAGGTGCTGGTCCAGGATGGGAAGCTGATAGAGAGAGAGTTCTCTCTTTCCTCAACTGATCTGTTCCATTCTCCAGCAGGTTTTGTTCAGTTGTCTCTTTCTTACACTGGTGCTTCCCCAGATGTTATAGCAATTTCTGGTATGCCTAAGGAGGTTGGAAAGGATGCCGCCGAGCAGGACTCAGGAACATGTGAGTCACTGGCCAAGGATTTGGACAAAATTGAGTTCCCTGATCCTAAGATTGTGAATGAAGACCACTTGATGGTGTCTGAGTATTTCGGCATTCCATGTGAGGAGACTCAGTGTTCTGATAGCTTGACTGCTTCCGAGGCTGAGAATCAAAGTTCTGAAGCCGGTGTTCGTCTTGTGGAGAGCTTCTCGGGATGCAGTGTTGAGTCTGTTCAGCCCCCTAAGGTTGATTCTCCACCAAGCAGTGTGTCAACAAATGGGGTCTCCTCTCCTTCTGTGCCTGCAAGCTCCGAATCATCTGAAGCTGATGCTGCTGCTTCTAAGTCTCCCAGTCAGGAACAAGCTTCAGGCACCAAAGATTTTAAGAAGAATGTGGATGTTAAAGATGGTGAGAGTGATTCATCAAATGGGGTTCCAAGTGACTCATTCCCTAAGCCTGTTGTGACTGTGAGCATTGTGCCAGAACCAAAGGTGGTGCAGCAGGACTTTGTAGACATGTACAATAAAAGCATGCAGCAATTTACTGAGTCATTAGCTAAAATGAAGCTTCCTATGGACATTGAAAGTGAACCAGCCAGTTCAGGGAATTCAAGCACTGAGCAAAAACTACAGGCATCAAAGAACACTAGTAGCTCCCGTGTATTTTATGGGAGCAGGGCTTTCTTCTGA 1272 0.456 MDSPQSVVSPFKSSVLGEGEKYKPDVFEVNGKESVIISNEDEFIGMLDVYIHQARDIHNICIYHKQDVYAKVCLTSNPDDTVSTKTINGGGRNPVFNENLRVNVRTVDSSLKCEIWMLSRVKNYLEDQLLGFALVPLSEVLVQDGKLIEREFSLSSTDLFHSPAGFVQLSLSYTGASPDVIAISGMPKEVGKDAAEQDSGTCESLAKDLDKIEFPDPKIVNEDHLMVSEYFGIPCEETQCSDSLTASEAENQSSEAGVRLVESFSGCSVESVQPPKVDSPPSSVSTNGVSSPSVPASSESSEADAAASKSPSQEQASGTKDFKKNVDVKDGESDSSNGVPSDSFPKPVVTVSIVPEPKVVQQDFVDMYNKSMQQFTESLAKMKLPMDIESEPASSGNSSTEQKLQASKNTSSSRVFYGSRAFF* 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g0715 423 Gene3D C2 domain 40 198 IPR035892 -
Dod05g0715 423 ProSiteProfiles C2 domain profile. 31 152 IPR000008 -
Dod05g0715 423 MobiDBLite consensus disorder prediction 386 412 - -
Dod05g0715 423 MobiDBLite consensus disorder prediction 270 347 - -
Dod05g0715 423 PANTHER EXPRESSED PROTEIN 1 423 - -
Dod05g0715 423 PANTHER CALCIUM-DEPENDENT LIPID-BINDING (CALB DOMAIN) FAMILY PROTEIN 1 423 - -
Dod05g0715 423 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 45 176 IPR035892 -
Dod05g0715 423 SMART C2_3c 46 149 IPR000008 -
Dod05g0715 423 MobiDBLite consensus disorder prediction 391 412 - -
Dod05g0715 423 MobiDBLite consensus disorder prediction 270 319 - -
Dod05g0715 423 Pfam C2 domain 46 152 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g0715 Dod-Chr5 10958614 10961148 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g0715 - - gmx:100796499 646.736
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g0715 05 10958614 10961148 Dod05g0715 05 10958614 10961148 ECH
Dod05g0715 05 10958614 10961148 Dod08g0217 08 2517475 2519092 PCT